RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 ZBED2Q9BTP6 218 aa13.41□□□□□ -0.26
CSTF2-201ENST00000372972 CCDC28BQ9BUN5 200 aa13.41□□□□□ -0.26
CSTF2-201ENST00000372972 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
CSTF2-201ENST00000372972 TRPC7Q9HCX4 862 aa13.41□□□□□ -0.26
CSTF2-201ENST00000372972 INTS10Q9NVR2 710 aaKnown RBP13.41□□□□□ -0.26
CSTF2-201ENST00000372972 PCDHGC4Q9Y5F7 938 aa13.41□□□□□ -0.26
CSTF2-201ENST00000372972 RAI2Q9Y5P3 530 aa13.41□□□□□ -0.26
CSTF2-201ENST00000372972 F8W8V4 182 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 NEMP1O14524 444 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 TEX28O15482 410 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 LILRB3O75022 631 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 CIB2O75838 187 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 SLC4A1P02730 911 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 PDHA1P08559 390 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 COX4I1P13073 169 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 KCNA5P22460 613 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 PSMA3P25788 255 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 EPHA3P29320 983 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 STC1P52823 247 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 TYSND1Q2T9J0 566 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 C6orf163Q5TEZ5 329 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 ISCA2Q86U28 154 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 ITIH5Q86UX2 942 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 CARNMT1Q8N4J0 409 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 MDGA1Q8NFP4 955 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 STMN2Q93045 179 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
CSTF2-201ENST00000372972 PPP1R36Q96LQ0 422 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 SLC22A12Q96S37 553 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 ADGRE3Q9BY15 652 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 POPDC3Q9HBV1 291 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 EML4Q9HC35 981 aaKnown RBP13.4□□□□□ -0.26
CSTF2-201ENST00000372972 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
CSTF2-201ENST00000372972 LOC100653049A0A140TA62 436 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 TYW5A2RUC4 315 aaKnown RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 TRPC5OSA6NMA1 111 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 MEI4A8MW99 385 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 ANKRD66B4E2M5 251 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 ZMPSTE24O75844 475 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 KRT34O76011 436 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 TMCC1O94876 653 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 CD160O95971 181 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 PENKP01210 267 aaPredicted RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 HDCP19113 662 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 SUOXP51687 545 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 TRMT5Q32P41 509 aaKnown RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 INO80DQ53TQ3 878 aaPredicted RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 SH2D4BQ5SQS7 431 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 PIM3Q86V86 326 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 SPNS2Q8IVW8 549 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 CPSF7Q8N684 471 aaKnown RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 ARL14EPQ8N8R7 260 aaPredicted RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 HJURPQ8NCD3 748 aaPredicted RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 LPCAT1Q8NF37 534 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 CLPTM1LQ96KA5 538 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 TCF12Q99081 682 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 FEM1AQ9BSK4 669 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 AARSD1Q9BTE6 412 aaKnown RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 ZBP1Q9H171 429 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 ALG9Q9H6U8 611 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 CYP4F12Q9HCS2 524 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 ZNF334Q9HCZ1 680 aaPredicted RBP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.4□□□□□ -0.27
CSTF2-201ENST00000372972 INSL6Q9Y581 213 aa13.4□□□□□ -0.27
CSTF2-201ENST00000372972 A0A088AWK7 358 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SLC22A2O15244 555 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 GREM1O60565 184 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SNAP91O60641 907 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 PSMG1O95456 288 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SPATA31D3P0C874 917 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 HNRNPLP14866 589 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 IMPDH1P20839 514 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 LPOP22079 712 aaPredicted RBP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 MZF1P28698 734 aaPredicted RBP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 ADSLP30566 484 aaPredicted RBP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 CA8P35219 290 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 TIAL1Q01085 375 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 GALNT1Q10472 559 aaPredicted RBP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 TXNDC8Q6A555 127 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 AFTPHQ6ULP2 937 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SPATA31D4Q6ZUB0 917 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 GPR65Q8IYL9 337 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 KLHL23Q8NBE8 558 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 ADAMTS19Q8TE59 1207 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 PHF21BQ96EK2 531 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 FAR2Q96K12 515 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 LENG8Q96PV6 779 aaPredicted RBP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 TACO1Q9BSH4 297 aaKnown RBP13.39□□□□□ -0.27
CSTF2-201ENST00000372972 OSBPL1AQ9BXW6 950 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 IL21Q9HBE4 155 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 GTSE1Q9NYZ3 720 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 SSX2IPQ9Y2D8 614 aa13.39□□□□□ -0.27
CSTF2-201ENST00000372972 RGSL1A5PLK6 1076 aa13.38□□□□□ -0.27
CSTF2-201ENST00000372972 GFRA2O00451 464 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms