RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 MAXP61244 160 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 DPTQ07507 201 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 TRAF2Q12933 501 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 MMRN1Q13201 1228 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 EIF3IQ13347 325 aaKnown RBP18.9■□□□□ 0.62
TMEM53-201ENST00000372235 CNGA3Q16281 694 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 TAF8Q7Z7C8 310 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 CBARPQ8N350 705 aaPredicted RBP18.9■□□□□ 0.62
TMEM53-201ENST00000372235 HDAC11Q96DB2 347 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 DTD2Q96FN9 168 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 MAK16Q9BXY0 300 aaKnown RBP18.9■□□□□ 0.62
TMEM53-201ENST00000372235 TEX101Q9BY14 249 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 RBM22Q9NW64 420 aaKnown RBP eCLIP18.9■□□□□ 0.62
TMEM53-201ENST00000372235 INTUQ9ULD6 942 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 PCDHB1Q9Y5F3 818 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 ANKRD36A6QL64 1941 aa18.9■□□□□ 0.62
TMEM53-201ENST00000372235 FREM2Q5SZK8 3169 aa18.89■□□□□ 0.62
TMEM53-201ENST00000372235 TMEM202A6NGA9 273 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 A8MX80 341 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 CD48P09326 243 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 CCNB1P14635 433 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 GLB1P16278 677 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 SLC1A1P43005 524 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 UCNP55089 124 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 ILF3Q12906 894 aaKnown RBP eCLIP18.89■□□□□ 0.61
TMEM53-201ENST00000372235 LRRC38Q5VT99 294 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 BROXQ5VW32 411 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 OGFOD3Q6PK18 319 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 ARL14Q8N4G2 192 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 WDR36Q8NI36 951 aaKnown RBP18.89■□□□□ 0.61
TMEM53-201ENST00000372235 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.89■□□□□ 0.61
TMEM53-201ENST00000372235 PDXPQ96GD0 296 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 GSDMCQ9BYG8 508 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 STRADBQ9C0K7 418 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 TRNAU1APQ9NX07 287 aaKnown RBP18.89■□□□□ 0.61
TMEM53-201ENST00000372235 DMXL2Q8TDJ6 3036 aa18.89■□□□□ 0.61
TMEM53-201ENST00000372235 CFAP47Q6ZTR5 3102 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 URB1O60287 2271 aaKnown RBP18.88■□□□□ 0.61
TMEM53-201ENST00000372235 ACACAQ13085 2346 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 PRSS38A1L453 326 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 TLX3O43711 291 aaPredicted RBP18.88■□□□□ 0.61
TMEM53-201ENST00000372235 FZD6O60353 706 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 MFAP3LO75121 409 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 MPOP05164 745 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 KDELR1P24390 212 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 MESDQ14696 234 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 PERM1Q5SV97 790 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 DENND2CQ68D51 928 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 RAET1GQ6H3X3 334 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 BZW1Q7L1Q6 419 aaKnown RBP18.88■□□□□ 0.61
TMEM53-201ENST00000372235 ZNF765Q7L2R6 523 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 CCDC13Q8IYE1 715 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 NRSN1Q8IZ57 195 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 CCNYQ8ND76 341 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 FAM46DQ8NEK8 389 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 GPR156Q8NFN8 814 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 SLC35G2Q8TBE7 412 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 PIH1D2Q8WWB5 315 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 OR1E3Q8WZA6 343 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 TMEM159Q96B96 161 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 TMEM74Q96NL1 305 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 RNF157Q96PX1 679 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 GFM1Q96RP9 751 aaKnown RBP18.88■□□□□ 0.61
TMEM53-201ENST00000372235 LGMNQ99538 433 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 DPH1Q9BZG8 443 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 BRD8Q9H0E9 1235 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 NHEJ1Q9H9Q4 299 aaPredicted RBP18.88■□□□□ 0.61
TMEM53-201ENST00000372235 CYP4F12Q9HCS2 524 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 FGF22Q9HCT0 170 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 DDX56Q9NY93 547 aaKnown RBP18.88■□□□□ 0.61
TMEM53-201ENST00000372235 SIRPGQ9P1W8 387 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 MOSPD1Q9UJG1 213 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 APPL1Q9UKG1 709 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 LRRK1Q38SD2 2015 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 FAM208BQ5VWN6 2430 aa18.88■□□□□ 0.61
TMEM53-201ENST00000372235 A0A0J9YYE9 177 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 TTC24A2A3L6 582 aaPredicted RBP18.87■□□□□ 0.61
TMEM53-201ENST00000372235 NPIPB15A6NHN6 443 aaPredicted RBP18.87■□□□□ 0.61
TMEM53-201ENST00000372235 NTN3O00634 580 aaPredicted RBP18.87■□□□□ 0.61
TMEM53-201ENST00000372235 NUDT21O43809 227 aaKnown RBP18.87■□□□□ 0.61
TMEM53-201ENST00000372235 MTA2O94776 668 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 TRBC1P01850 177 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 GM2AP17900 193 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 ETV3P41162 512 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 ATP13A4Q4VNC1 1196 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 HEATR4Q86WZ0 1026 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 KYQ8NBH2 561 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 NSMCE3Q96MG7 304 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 ADGRE3Q9BY15 652 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 DPEP2Q9H4A9 486 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 CAAP1Q9H8G2 361 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 TTLL3Q9Y4R7 772 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 ENTPD2Q9Y5L3 495 aa18.87■□□□□ 0.61
TMEM53-201ENST00000372235 CCDC187A0A096LP49 1063 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 GOLGA6CA6NDK9 693 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 GOLGA6BA6NDN3 693 aa18.86■□□□□ 0.61
TMEM53-201ENST00000372235 AKR1B15C9JRZ8 316 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 PPP1R12AO14974 1030 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-201ENST00000372235 CELA2BP08218 269 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms