RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZBTB46Q86UZ6 589 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 FBXO25Q8TCJ0 367 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 NXNL1Q96CM4 212 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 C11orf24Q96F05 449 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ACO2Q99798 780 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 UPB1Q9UBR1 384 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 RIPK3Q9Y572 518 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ATXN2Q99700 1313 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZSCAN5BA6NJL1 495 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ONECUT3O60422 494 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 SNAPC5O75971 98 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 PTX3P26022 381 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 GTF2E2P29084 291 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 PLA2G4EQ3MJ16 856 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 TFDP3Q5H9I0 405 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 MTMR9Q96QG7 549 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 OMDQ99983 421 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 PADI4Q9UM07 663 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 FAM47E-STBD1D6RA91 191 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZBTB11O95625 1053 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 SERPINF2P08697 491 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ETS1P14921 441 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 HDCP19113 662 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 ABRAQ8N0Z2 381 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 GTPBP2Q9BX10 602 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 C1QTNF7Q9BXJ2 289 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 TRIM2Q9C040 744 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 UCKL1Q9NWZ5 548 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 DNMT3LQ9UJW3 386 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 POLR1DQ9Y2S0 133 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 SPACA6W5XKT8 324 aa14.08□□□□□ -0.16
RAPGEF1-202ENST00000372190 RIPK2O43353 540 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 REM1O75628 298 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 OR2B6P58173 313 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 GNG2P59768 71 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 LIN52Q52LA3 116 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PPP2R2DQ66LE6 453 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 C12orf56Q8IXR9 622 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 METTL6Q8TCB7 284 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ELMO3Q96BJ8 720 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PLIN3O60664 434 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 MAP3K6O95382 1288 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PIGNO95427 931 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 GLUD2P49448 558 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ACOX1Q15067 660 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 SLC45A4Q5BKX6 768 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 FAXCQ5TGI0 409 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 SRFBP1Q8NEF9 429 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 OR4C6Q8NH72 309 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CRELD1Q96HD1 420 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 APOL2Q9BQE5 337 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PRDM8Q9NQV8 689 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PTTG2Q9NZH5 202 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PADI2Q9Y2J8 665 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 RECQL5O94762 991 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CD40LGP29965 261 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 GRB14Q14449 540 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 KIAA1324Q6UXG2 1013 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 LPCAT1Q8NF37 534 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 AENQ8WTP8 325 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PPP1R16AQ96I34 528 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 VPS35Q96QK1 796 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 FARSBQ9NSD9 589 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 MARCH2Q9P0N8 246 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ARHGAP20Q9P2F6 1191 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 AP4B1Q9Y6B7 739 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 RBAK-RBAKDNI3L0D1 243 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ERVK-10P10266 1014 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CCL5P13501 91 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CPA3P15088 417 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ATP5F1P24539 256 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PTENP60484 403 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PON2Q15165 354 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 RAB12Q6IQ22 244 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 EIF5AL1Q6IS14 154 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 SYCE2Q6PIF2 218 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CRTC3Q6UUV7 619 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CEP68Q76N32 757 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CTU1Q7Z7A3 348 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 RBM12BQ8IXT5 1001 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PCDH18Q9HCL0 1135 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 LTBP3Q9NS15 1303 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 FGF19O95750 216 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 CYP2A6P11509 494 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 SMPD1P17405 629 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 IDH2P48735 452 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 PRKAA2P54646 552 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 EVX2Q03828 476 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 FPGSQ05932 587 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 E2F2Q14209 437 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ATAD3CQ5T2N8 411 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 RNF220Q5VTB9 566 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZNF571Q7Z3V5 609 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 GPALPP1Q8IXQ4 340 aa14.07□□□□□ -0.16
RAPGEF1-202ENST00000372190 ACOT12Q8WYK0 555 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms