RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MAGEL2Q9UJ55 1249 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ADAM30Q9UKF2 790 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 A0A088AWK7 358 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 A0A1W2PQ67 120 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC7A4O43246 635 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 MGRN1O60291 552 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 NTRK1P04629 796 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ASGR1P07306 291 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CLTBP09497 229 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 UQCRBP14927 111 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TACR2P21452 398 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF10P21506 573 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 PSMA3P25788 255 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CDC25CP30307 473 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 GSTT1P30711 240 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 WDR4P57081 412 aaKnown RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 FOLH1Q04609 750 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TIGD2Q4W5G0 525 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 RHBDF2Q6PJF5 856 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 SPESP1Q6UW49 350 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CPNE8Q86YQ8 564 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 C10orf53Q8N6V4 93 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 MTFMTQ96DP5 389 aaKnown RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 NFKBIZQ9BYH8 718 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 NLNQ9BYT8 704 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 EPB41L4BQ9H329 900 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 RPS6KB2Q9UBS0 482 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CAB39Q9Y376 341 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 KCNU1A8MYU2 1149 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 KPNA4O00629 521 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 LMO2P25791 158 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CCL23P55773 120 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 SKP1P63208 163 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TSNQ15631 228 aaKnown RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CROCCP3Q8IVE0 287 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TBATAQ96M53 351 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 C12orf65Q9H3J6 166 aaKnown RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 HMG20AQ9NP66 347 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ENTPD4Q9Y227 616 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TBC1D3BA6NDS4 549 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 YJEFN3A6XGL0 299 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 FOXO6A8MYZ6 492 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 C1RP00736 705 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TALDO1P37837 337 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 SOWAHAQ2M3V2 549 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TSTD2Q5T7W7 516 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 TYW3Q6IPR3 259 aaKnown RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 AMIGO2Q86SJ2 522 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 DSELQ8IZU8 1212 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 C19orf60Q96EN9 201 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 MYO19Q96H55 970 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 C1orf50Q9BV19 199 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 MUC13Q9H3R2 512 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ZFYVE1Q9HBF4 777 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CDH22Q9UJ99 828 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ARL5CA6NH57 179 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ITGA2P17301 1181 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 CTPS1P17812 591 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DPYSQ14117 519 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 KIAA0930Q6ICG6 404 aaPredicted RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 PPP4R4Q6NUP7 873 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC39A4Q6P5W5 647 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 PAGE2Q7Z2X7 111 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 GPR152Q8TDT2 470 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 A0A1B0GVM2 712 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 TCAF2A6NFQ2 919 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 C1QTNF3-AMACRE9PGA6 284 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 SCAMP3O14828 347 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 PGM3O95394 542 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 SELPP16109 830 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 C21orf59P57076 290 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 GNA12Q03113 381 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ARHGAP1Q07960 439 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 TRMT10BQ6PF06 316 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 CFAP52Q8N1V2 620 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 TCAIMQ8N3R3 496 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 CPSF7Q8N684 471 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 SPATA22Q8NHS9 363 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 NELL1Q92832 810 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 CLP1Q92989 425 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ITCHQ96J02 903 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 NPAS2Q99743 824 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 SYNDIG1Q9H7V2 258 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 GRIN2DO15399 1336 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 A0A1B0GW55 424 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ACSL4O60488 711 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 SH3BGRLO75368 114 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms