RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 CDH19Q9H159 772 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 EBF2Q9HAK2 575 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 FZD3Q9NPG1 666 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 RAB6BQ9NRW1 208 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 ANKRD6Q9Y2G4 727 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 USP34Q70CQ2 3546 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 KNL1Q8NG31 2342 aa13.78□□□□□ -0.2
SSR4-202ENST00000370085 A0A1B0GVT2 93 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 CCDC188H7C350 402 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 AP3B1O00203 1094 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
SSR4-202ENST00000370085 AP2A1O95782 977 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 THEGLP0DJG4 465 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 ENGP17813 658 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 SDHBP21912 280 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 HTR1BP28222 390 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.21
SSR4-202ENST00000370085 KCNJ1P48048 391 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 THOP1P52888 689 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 IRX4P78413 519 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 SEMG2Q02383 582 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 GRIK2Q13002 908 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 MTM1Q13496 603 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 IHHQ14623 411 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 SF3A2Q15428 464 aaKnown RBP13.77□□□□□ -0.21
SSR4-202ENST00000370085 LRRK1Q38SD2 2015 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 SIRPB2Q5JXA9 342 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 ZDHHC20Q5W0Z9 365 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 ABI3BPQ7Z7G0 1075 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 CENPTQ96BT3 561 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 COQ10AQ96MF6 247 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 EDEM2Q9BV94 578 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 SMOC1Q9H4F8 434 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 PARD6AQ9NPB6 346 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 ZNF711Q9Y462 761 aa13.77□□□□□ -0.21
SSR4-202ENST00000370085 LNP1A1A4G5 178 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 C2orf81A6NN90 581 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 YKT6O15498 198 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 PPFIA2O75334 1257 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 CLDN7O95471 211 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 METTL18O95568 372 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 ECEL1O95672 775 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 CRTAMO95727 393 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 AGTP01019 485 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 TSHRP16473 764 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 LHCGRP22888 699 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 KELP23276 732 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 ARRB1P49407 418 aaPredicted RBP13.76□□□□□ -0.21
SSR4-202ENST00000370085 STC1P52823 247 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 BASP1P80723 227 aaKnown RBP13.76□□□□□ -0.21
SSR4-202ENST00000370085 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
SSR4-202ENST00000370085 LAMB3Q13751 1172 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 FGL2Q14314 439 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 IRF4Q15306 451 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 FAM182AQ5T1J6 154 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 TCEAL6Q6IPX3 200 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 PPP1R21Q6ZMI0 780 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 GCNT7Q6ZNI0 430 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 Q6ZSR6 202 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 ZNF765Q7L2R6 523 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 GLT6D1Q7Z4J2 308 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 CREG2Q8IUH2 290 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 KIAA2013Q8IYS2 634 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 DNAAF3Q8N9W5 541 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 TP53I13Q8NBR0 393 aaPredicted RBP13.76□□□□□ -0.21
SSR4-202ENST00000370085 BLOC1S5Q8TDH9 187 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 TCEAL3Q969E4 200 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 DTD2Q96FN9 168 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 KLF6Q99612 283 aaPredicted RBP13.76□□□□□ -0.21
SSR4-202ENST00000370085 ETNK1Q9HBU6 452 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 TMEM9BQ9NQ34 198 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
SSR4-202ENST00000370085 PKP3Q9Y446 797 aa13.76□□□□□ -0.21
SSR4-202ENST00000370085 A0A1W2PR77 199 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 CACNB4O00305 520 aaPredicted RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 KRT14P02533 472 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 SLC4A1P02730 911 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 PCCBP05166 539 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 APRTP07741 180 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 RPL22P35268 128 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 ADRA1AP35348 466 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 ETV3P41162 512 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 CLDN2P57739 230 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 NXPH1P58417 271 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 CDK16Q00536 496 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 PTSQ03393 145 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
SSR4-202ENST00000370085 DPTQ07507 201 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 CDH17Q12864 832 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 SEMA5AQ13591 1074 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 TUBB2AQ13885 445 aa13.75□□□□□ -0.21
SSR4-202ENST00000370085 KIF19Q2TAC6 998 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms