RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 DHX15O43143 795 aaKnown RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ITM2AO43736 263 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ALDH7A1P49419 539 aaKnown RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 AIF1P55008 147 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 MPP1Q00013 466 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ALFQ53S48 1182 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 OTOP3Q7RTS5 596 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 VN1R5Q7Z5H4 357 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 GPR180Q86V85 440 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 PDSS2Q86YH6 399 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 OR4L1Q8NH43 312 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 GINS4Q9BRT9 223 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 TDRD1Q9BXT4 1180 aaKnown RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 GLOD4Q9HC38 313 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 GTF2A1LQ9UNN4 478 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 TCRBV7S3A2A0A539 114 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 SLC22A2O15244 555 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 ITGA2P17301 1181 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 NUP62P37198 522 aaPredicted RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 IFNGR2P38484 337 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 RPL26P61254 145 aaKnown RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 IRF8Q02556 426 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 SIM2Q14190 667 aaPredicted RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 CDK20Q8IZL9 346 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 HM13Q8TCT9 377 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 TFAP2BQ92481 460 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 P2RX7Q99572 595 aaKnown RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 BPIFA1Q9NP55 256 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 GNPTGQ9UJJ9 305 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 DCCP43146 1447 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 LRIG2O94898 1065 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 LINGO3P0C6S8 592 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 IGFBP5P24593 272 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 SPIBQ01892 262 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 RAP1GAP2Q684P5 730 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 PNPT1Q8TCS8 783 aaKnown RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 AZIN2Q96A70 460 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 TRIM8Q9BZR9 551 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 CRISPLD1Q9H336 500 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 SF3B1O75533 1304 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 AFDNP55196 1824 aaKnown RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 MOXD2PA6NHM9 499 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 RFXANKO14593 260 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 CKMP06732 381 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 FKBP1CQ5VVH2 108 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 ZC3H7AQ8IWR0 971 aaKnown RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 SLC35B2Q8TB61 432 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 LINGO1Q96FE5 620 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 DUSP16Q9BY84 665 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 BCAS3Q9H6U6 928 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 PREBQ9HCU5 417 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 PCDH12Q9NPG4 1184 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 RASSF1Q9NS23 344 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF536O15090 1300 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 C9JVG2 144 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 WARSP23381 471 aaKnown RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 ABL2P42684 1182 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 NRG1Q02297 640 aaPredicted RBP15.93■□□□□ 0.14
COL17A1-202ENST00000369733 ADAMTSL2Q86TH1 951 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 COPS5Q92905 334 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 PANX1Q96RD7 426 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 ZYG11BQ9C0D3 744 aa15.93■□□□□ 0.14
COL17A1-202ENST00000369733 SAGE2PA6NJ88 616 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 TTLL13PA6NNM8 815 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 A8MX80 341 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 H3BSA7 217 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ATP12AP54707 1039 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 PHF10Q8WUB8 498 aaKnown RBP15.92■□□□□ 0.14
COL17A1-202ENST00000369733 KLHL32Q96NJ5 620 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 CACNA1FO60840 1977 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ANGPTL1O95841 491 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ADAM17P78536 824 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ECT2LQ008S8 904 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 STX4Q12846 297 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 GALNT3Q14435 633 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 PITRM1Q5JRX3 1037 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 NUDT18Q6ZVK8 323 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF567Q8N184 647 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 RAB2BQ8WUD1 216 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 CD101Q93033 1021 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 NODALQ96S42 347 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 GBA3Q9H227 469 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF222Q9UK12 451 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 SSR3Q9UNL2 185 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 CORO2BQ9UQ03 480 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 MYPNQ86TC9 1320 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 HAT1O14929 419 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 HOXB6P17509 224 aaKnown RBP15.92■□□□□ 0.14
COL17A1-202ENST00000369733 HOXD10P28358 340 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 NOS3P29474 1203 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 THOP1P52888 689 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 RAB15P59190 212 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 GPX6P59796 221 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 BCL2L1Q07817 233 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 ABHD15Q6UXT9 468 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 P2RY8Q86VZ1 359 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 YIPF2Q9BWQ6 316 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 MARCH2Q9P0N8 246 aa15.92■□□□□ 0.14
COL17A1-202ENST00000369733 CNOT6Q9ULM6 557 aaKnown RBP15.92■□□□□ 0.14
COL17A1-202ENST00000369733 RNASEH1O60930 286 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms