RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 LSMEM2Q8N112 164 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 KIAA0895Q8NCT3 520 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 DIRAS2Q96HU8 199 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 ZNF341Q9BYN7 854 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 PIGUQ9H490 435 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 KCNH7Q9NS40 1196 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 HOXC10Q9NYD6 342 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 ERAP1Q9NZ08 941 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 AFF4Q9UHB7 1163 aaKnown RBP10.44□□□□□ -0.74
PRDM1-201ENST00000369089 M0R233 179 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 NDST3O95803 873 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 PDGFRAP16234 1089 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 GLRA2P23416 452 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 CHRNA5P30532 468 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 ALCAMQ13740 583 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 ZMYND11Q15326 602 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 HECTD3Q5T447 861 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 HEATR6Q6AI08 1181 aaKnown RBP10.44□□□□□ -0.74
PRDM1-201ENST00000369089 SPESP1Q6UW49 350 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 SLC37A3Q8NCC5 494 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 TRPV1Q8NER1 839 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 CENPIQ92674 756 aaPredicted RBP10.44□□□□□ -0.74
PRDM1-201ENST00000369089 NPLQ9BXD5 320 aaPredicted RBP10.44□□□□□ -0.74
PRDM1-201ENST00000369089 RIMKLBQ9ULI2 386 aa10.44□□□□□ -0.74
PRDM1-201ENST00000369089 CNOT6Q9ULM6 557 aaKnown RBP10.44□□□□□ -0.74
PRDM1-201ENST00000369089 NRP2O60462 931 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 RPLP0P05388 317 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 DLDP09622 509 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 RAB3BP20337 219 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 WARSP23381 471 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ZNF81P51508 661 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 NOMO3P69849 1222 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TXNL4AP83876 142 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 DMP1Q13316 513 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 NOMO1Q15155 1222 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 C10orf62Q5T681 223 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TMEM236Q5W0B7 351 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ST8SIA2Q92186 375 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TEKT5Q96M29 485 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PELOQ9BRX2 385 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 INO80BQ9C086 356 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 DSN1Q9H410 356 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 RANBP3Q9H6Z4 567 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TIGARQ9NQ88 270 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 MCUBQ9NWR8 336 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TMEM260Q9NX78 707 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 SEC14L4Q9UDX3 406 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PCDHGB3Q9Y5G1 929 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ANKRD63C9JTQ0 380 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 H0YCG3 227 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 DFNA5O60443 496 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PPM1BO75688 479 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 BCAS2O75934 225 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 WDPCPO95876 746 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 EGFRP00533 1210 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 CDK1P06493 297 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 GPIP06744 558 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 MAOBP27338 520 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 DCKP27707 260 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ARL4AP40617 200 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 MARCKSL1P49006 195 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ATXN1P54253 815 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TEAD4Q15561 434 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 GPR162Q16538 588 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 KLHL26Q53HC5 615 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 METTL23Q86XA0 190 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ASB9Q96DX5 294 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 THUMPD3Q9BV44 507 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 B3GNT2Q9NY97 397 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 KCNH4Q9UQ05 1017 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 EI24O14681 340 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 KLF11O14901 512 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 CD3EAPO15446 510 aaKnown RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TP53P04637 393 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 POLBP06746 335 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ALDH3B2P48448 385 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 GPX6P59796 221 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 GRIK5Q16478 980 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 QRICH1Q2TAL8 776 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 SPATS1Q496A3 300 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PLEKHG4Q58EX7 1191 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 SLFN11Q7Z7L1 901 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ZNF605Q86T29 641 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 UBE2J2Q8N2K1 259 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TTC29Q8NA56 475 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-201ENST00000369089 TRPM4Q8TD43 1214 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 FCGR1BQ92637 280 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ZSWIM3Q96MP5 696 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 SLC30A2Q9BRI3 323 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 LATS2Q9NRM7 1088 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 ASNSD1Q9NWL6 643 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PRKAG2Q9UGJ0 569 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 U3KQV3 271 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 M0QZ92 97 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 SLC30A4O14863 429 aa10.43□□□□□ -0.74
PRDM1-201ENST00000369089 INPPL1O15357 1258 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms