RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ZFP28Q8NHY6 868 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 ZCCHC10Q8TBK6 192 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 PPCDCQ96CD2 204 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 ZNF184Q99676 751 aaPredicted RBP18.18■□□□□ 0.5
SNX27-202ENST00000368841 OXCT2Q9BYC2 517 aaPredicted RBP18.18■□□□□ 0.5
SNX27-202ENST00000368841 CACNG4Q9UBN1 327 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 MORF4L1Q9UBU8 362 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 DGKBQ9Y6T7 804 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 POU5F1Q01860 360 aaKnown RBP18.18■□□□□ 0.5
SNX27-202ENST00000368841 FAM83AQ86UY5 434 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 LNX2Q8N448 690 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 FAR1Q8WVX9 515 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 GMIPQ9P107 970 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 CNTNAP1P78357 1384 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 E7ENQ6 273 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 TMCC2O75069 709 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 SIN3BO75182 1162 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 OR1D2P34982 312 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 DACT2Q5SW24 774 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 C1orf186Q6ZWK4 172 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 OR52J3Q8NH60 311 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 SLC9A6Q92581 669 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 KCNK4Q9NYG8 393 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 NDUFA13Q9P0J0 144 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 WBP11Q9Y2W2 641 aaKnown RBP18.18■□□□□ 0.5
SNX27-202ENST00000368841 GNB5O14775 395 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 TLR5O60602 858 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 LGR5O75473 907 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 SEC24AO95486 1093 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 TNK2Q07912 1038 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 ULK3Q6PHR2 472 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 APBB2Q92870 758 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 BTBD3Q9Y2F9 522 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 TFECO14948 347 aaPredicted RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 GIMD1P0DJR0 217 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 CDK7P50613 346 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 ZNF155Q12901 538 aaPredicted RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 PDK3Q15120 406 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 JAZF1Q86VZ6 243 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 SLC16A10Q8TF71 515 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 MCRS1Q96EZ8 462 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 CEP295NLQ96MC4 621 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 RNF157Q96PX1 679 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 CPSF4LA6NMK7 179 aaKnown RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 MT-ND1P03886 318 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 NT5EP21589 574 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 FAM182AQ5T1J6 154 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 PAGE2Q7Z2X7 111 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 ADGRG6Q86SQ4 1221 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 PACS2Q86VP3 889 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 ZNF248Q8NDW4 579 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 MYO19Q96H55 970 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 C12orf65Q9H3J6 166 aaKnown RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 ENOPH1Q9UHY7 261 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 TIPRLO75663 272 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 RNASEH2AO75792 299 aaKnown RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 MLYCDO95822 493 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 FBXW8Q8N3Y1 598 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 OR8D1Q8WZ84 308 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 LMAN2LQ9H0V9 348 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 ENTPD5O75356 428 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 ZNF132P52740 706 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 PURAQ00577 322 aaKnown RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 ECM1Q16610 540 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 LDLRAP1Q5SW96 308 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 NKD1Q969G9 470 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 UROC1Q96N76 676 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX27-202ENST00000368841 BIRC5O15392 142 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 ITGA2BP08514 1039 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 SP3Q02447 781 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 INTS11Q5TA45 600 aaKnown RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 RBM44Q6ZP01 1051 aaKnown RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 OR14C36Q8NHC7 312 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 KBTBD7Q8WVZ9 684 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 SMPDL3BQ92485 455 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 DSN1Q9H410 356 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 EVLQ9UI08 416 aaPredicted RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 LEF1Q9UJU2 399 aaPredicted RBP18.17■□□□□ 0.5
SNX27-202ENST00000368841 MPSTP25325 297 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 DNASE1L2Q92874 299 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 C15orf41Q9Y2V0 281 aa18.17■□□□□ 0.5
SNX27-202ENST00000368841 OR2AG2A6NM03 316 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 CYP1A2P05177 515 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 CXCR2P25025 360 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 MBTD1Q05BQ5 628 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ST3GAL1Q11201 340 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 ZNF433Q8N7K0 673 aaPredicted RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 TSEN15Q8WW01 171 aaKnown RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 CHID1Q9BWS9 393 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 NKIRAS2Q9NYR9 191 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 SLC17A7Q9P2U7 560 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 SH3D21A4FU49 640 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 SLC6A2P23975 617 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 IL18R1Q13478 541 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 SLC34A3Q8N130 599 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 EXOSC8Q96B26 276 aaKnown RBP18.16■□□□□ 0.5
SNX27-202ENST00000368841 ASB2Q96Q27 587 aa18.16■□□□□ 0.5
SNX27-202ENST00000368841 STX16-NPEPL1H3BU86 382 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms