RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PBX3P40426 434 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 NADSYN1Q6IA69 706 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 NSUN5Q96P11 429 aaKnown RBP18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 SMIM14Q96QK8 99 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 POLR3BQ9NW08 1133 aaPredicted RBP18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 C9JVG2 144 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 SNUPNO95149 360 aaKnown RBP18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 CSPG5O95196 566 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 CD1DP15813 335 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 TRIM25Q14258 630 aaKnown RBP18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 C6orf52Q5T4I8 152 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 UTP6Q9NYH9 597 aaKnown RBP18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 MIA3Q5JRA6 1907 aa18.11■□□□□ 0.49
UBQLN4-201ENST00000368309 MYO16Q9Y6X6 1858 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 PRSS51A0A1B0GVH4 220 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 WISP3O95389 354 aaPredicted RBP18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 FOXA1P55317 472 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 OR4D1Q15615 310 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 FAM45BPQ6NSW5 357 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 RSPO2Q6UXX9 243 aaPredicted RBP18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 FAM45AQ8TCE6 357 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 TADA1Q96BN2 335 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 EXOC2Q96KP1 924 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 IL1RL2Q9HB29 575 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 TLR8Q9NR97 1041 aaKnown RBP18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 AP4B1Q9Y6B7 739 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 DRGXA6NNA5 263 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 NT5C1B-RDH14C9J2C7 533 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 H3BMM5 538 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 EOMESO95936 686 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 ETS2P15036 469 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 CNPY1Q3B7I2 92 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 LARP4Q71RC2 724 aaKnown RBP eCLIP18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 LPGAT1Q92604 370 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 C19orf60Q96EN9 201 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 SPON2Q9BUD6 331 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 UNC93B1Q9H1C4 597 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 FAM50BQ9Y247 325 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 UBA6A0AVT1 1052 aaPredicted RBP18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 MRASO14807 208 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 GSTT1P30711 240 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 GATMP50440 423 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 HERVK_113P63132 956 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 GRM2Q14416 872 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 LGI2Q8N0V4 545 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 OR7D4Q8NG98 312 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 ASB9Q96DX5 294 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 KCNA7Q96RP8 456 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 CENPKQ9BS16 269 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 SPATA16Q9BXB7 569 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 ERVK-6Q9BXR3 956 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 AKTIPQ9H8T0 292 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 MID1IP1Q9NPA3 183 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 EPS15L1Q9UBC2 864 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 DNAJC15Q9Y5T4 150 aa18.1■□□□□ 0.49
UBQLN4-201ENST00000368309 NRP2O60462 931 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 ALDOCP09972 364 aaKnown RBP18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 CDKL1Q00532 357 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 DUSP4Q13115 394 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 PARP15Q460N3 678 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 FAM26DQ5JW98 314 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 MRNIPQ6NTE8 343 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 EP400NLQ6ZTU2 488 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 SATL1Q86VE3 508 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 FATE1Q969F0 183 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 APPL1Q9UKG1 709 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 DOCK4Q8N1I0 1966 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 MYOCOSA0A1B0GUC4 107 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 INPPL1O15357 1258 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 TLR5O60602 858 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 FDXRP22570 491 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 INHBCP55103 352 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 NRF1Q16656 503 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 KIF19Q2TAC6 998 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 RNF19BQ6ZMZ0 732 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 GALNT15Q8N3T1 639 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 OR4L1Q8NH43 312 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 DLG3Q92796 817 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 FNDC3AQ9Y2H6 1198 aaKnown RBP18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 PRAMEF11O60813 436 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 CDK14O94921 469 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 INHBEP58166 350 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 MAPRE2Q15555 327 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 UGT3A2Q3SY77 523 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 IYDQ6PHW0 289 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 FUNDC1Q8IVP5 155 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 TMEM102Q8N9M5 508 aaPredicted RBP18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 TRPC4APQ8TEL6 797 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 L3HYPDHQ96EM0 354 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 NSMCE3Q96MG7 304 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 IL37Q9NZH6 218 aa18.09■□□□□ 0.49
UBQLN4-201ENST00000368309 DENRO43583 198 aaKnown RBP18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 OR6B1O95007 311 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 TACR2P21452 398 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 GALNT1Q10472 559 aaPredicted RBP18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 TICAM1Q8IUC6 712 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 CLYBLQ8N0X4 340 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 ADCY4Q8NFM4 1077 aa18.08■□□□□ 0.49
UBQLN4-201ENST00000368309 BRSK1Q8TDC3 778 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms