RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SLC9A8Q9Y2E8 581 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 A8MU76 341 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 VGLL3A8MV65 326 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 PEX11AO75192 247 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 OR6A2O95222 327 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 PRKCGP05129 697 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 FCGR1AP12314 374 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 TTMPQ5BVD1 217 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CCDC81Q6ZN84 652 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 RDH11Q8TC12 318 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 YIPF3Q9GZM5 350 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 FAM83DQ9H4H8 585 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 DNAJC28Q9NX36 388 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 FBXW11Q9UKB1 542 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 PSME2Q9UL46 239 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 SLC12A4Q9UP95 1085 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 USP1O94782 785 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 EPORP19235 508 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 NDST2P52849 883 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 RAD23AP54725 363 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 RHBDF2Q6PJF5 856 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 BEND7Q8N7W2 519 aaPredicted RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 NTAN1Q96AB6 310 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 ARMCX1Q9P291 453 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 WNT6Q9Y6F9 365 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CCDC154A6NI56 674 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 SLC20A2Q08357 652 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CERS6Q6ZMG9 384 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 GALNT13Q8IUC8 556 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PCDH19Q8TAB3 1148 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 FIG4Q92562 907 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CYP2S1Q96SQ9 504 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ERVW-1Q9UQF0 538 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ADAMTSL3P82987 1691 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 HPCAL1P37235 193 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 FBXO46Q6PJ61 603 aaPredicted RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 MMAAQ8IVH4 418 aaKnown RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 SLC39A8Q9C0K1 460 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 KRCC1Q9NPI7 259 aaPredicted RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 POP4O95707 220 aaKnown RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 AP2A1O95782 977 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 KCNA3P22001 575 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ILF3Q12906 894 aaKnown RBP eCLIP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 XKR6Q5GH73 641 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ATXN7L2Q5T6C5 722 aaPredicted RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 TXNDC11Q6PKC3 985 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 LINGO1Q96FE5 620 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 BCO2Q9BYV7 579 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 EBF3Q9H4W6 596 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ARMC7Q9H6L4 198 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 FKBP6O75344 327 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 OTCP00480 354 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 NTSP30990 170 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 GRIA4P48058 902 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CCT8P50990 548 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 IL10RBQ08334 325 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CA9Q16790 459 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 TRABD2AQ86V40 505 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 DHFR2Q86XF0 187 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PTCD2Q8WV60 388 aaKnown RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PHACTR1Q9C0D0 580 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CHRAC1Q9NRG0 131 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 HDAC3O15379 428 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ACADSP16219 412 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 TBCELQ5QJ74 424 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 DEPDC1Q5TB30 811 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF567Q8N184 647 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 CLEC4CQ8WTT0 213 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ASZ1Q8WWH4 475 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PMEPA1Q969W9 287 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 AP2M1Q96CW1 435 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PPP3R2Q96LZ3 170 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PCYT2Q99447 389 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 HEPHQ9BQS7 1158 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ARHGAP9Q9BRR9 750 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 SPATA6Q9NWH7 488 aaPredicted RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 COMMD8Q9NX08 183 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 RGS20O76081 388 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 C2P06681 752 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 SLC11A1P49279 550 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 NEK3P51956 506 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 RALGDSQ12967 914 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PHF19Q5T6S3 580 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 PLEKHM3Q6ZWE6 761 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 RNF148Q8N7C7 305 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
SYNE1-204ENST00000367248 SHDQ96IW2 340 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 KLHL32Q96NJ5 620 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 HSD3B7Q9H2F3 369 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 ATAD3AQ9NVI7 634 aa11.59□□□□□ -0.55
SYNE1-204ENST00000367248 B4DGG1 531 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 ANGPT1Q15389 498 aa11.58□□□□□ -0.55
SYNE1-204ENST00000367248 TEAD2Q15562 447 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms