RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 FAM114A1Q8IWE2 563 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 MYCBPAPQ8TBZ2 947 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 ING5Q8WYH8 240 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 NEU1Q99519 415 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 SEPT5Q99719 369 aaPredicted RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 TUBGCP2Q9BSJ2 902 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 PI4K2AQ9BTU6 479 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 TINAGL1Q9GZM7 467 aaPredicted RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 ZNF334Q9HCZ1 680 aaPredicted RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 NLRC4Q9NPP4 1024 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 SACM1LQ9NTJ5 587 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 TAB2Q9NYJ8 693 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 LIMA1Q9UHB6 759 aaKnown RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 NME7Q9Y5B8 376 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.13□□□□□ -1.11
YBX3-204ENST00000366290 MIA3Q5JRA6 1907 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 EP300Q09472 2414 aaPredicted RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 MYH10P35580 1976 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MYBPHLA2RUH7 354 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 PRR23AA6NEV1 266 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SMTNL1A8MU46 457 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 RASA4BC9J798 803 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 E9PLN8 166 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 BTN3A1O00481 513 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 P4HA2O15460 535 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 RASA4O43374 803 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SOAT2O75908 522 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 NOL4O94818 638 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 UNC5CO95185 931 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 CHEK2O96017 543 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 AOC1P19801 751 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 ACAT1P24752 427 aaKnown RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 CDC25CP30307 473 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 APOBEC3AP31941 199 aaPredicted RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 GNL1P36915 607 aaPredicted RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 PIK3CAP42336 1068 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MTIF2P46199 727 aaKnown RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 STARD6P59095 220 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 RPL10AP62906 217 aaKnown RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 TNNC1P63316 161 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 GPC5P78333 572 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 FCHO2Q0JRZ9 810 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SLC13A2Q13183 592 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 TRPC3Q13507 836 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 VEPH1Q14D04 833 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 TEAD2Q15562 447 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SGSM1Q2NKQ1 1148 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MGAT5BQ3V5L5 792 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 FAM102AQ5T9C2 384 aaPredicted RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 TANGO2Q6ICL3 276 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 C4orf50Q6ZRC1 276 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 CREBRFQ8IUR6 639 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MFSD6LQ8IWD5 586 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 PDPRQ8NCN5 879 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 FBXL13Q8NEE6 735 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 DEPDC1BQ8WUY9 529 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MAML1Q92585 1016 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 DNASE1L2Q92874 299 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MCRS1Q96EZ8 462 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 LOXL4Q96JB6 756 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SPATA17Q96L03 361 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 CCDC138Q96M89 665 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 VKORC1Q9BQB6 163 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 KXD1Q9BQD3 176 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SYT15Q9BQS2 421 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 MRPL45Q9BRJ2 306 aaKnown RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 TLR10Q9BXR5 811 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 PLA2G2FQ9BZM2 168 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 UNKQ9C0B0 810 aaKnown RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 REXO4Q9GZR2 422 aaKnown RBP8.12□□□□□ -1.11
YBX3-204ENST00000366290 SDCBP2Q9H190 292 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 NDST4Q9H3R1 872 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 SMURF2Q9HAU4 748 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 ZFP14Q9HCL3 533 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 ARHGEF3Q9NR81 526 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 RAB20Q9NX57 234 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 GTF3C4Q9UKN8 822 aa8.12□□□□□ -1.11
YBX3-204ENST00000366290 GTPBP10A4D1E9 387 aaKnown RBP8.11□□□□□ -1.11
YBX3-204ENST00000366290 LGALS16A8MUM7 142 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 BECN2A8MW95 431 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 M0QYG6 137 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 HCRTO43612 131 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 STX10O60499 249 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 ATP2C2O75185 946 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 CSH1P0DML2 217 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 CSH2P0DML3 217 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 MYL4P12829 197 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 P4HA1P13674 534 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 PSMC3P17980 439 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 CYP2F1P24903 491 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 DDX6P26196 483 aaKnown RBP eCLIP8.11□□□□□ -1.11
YBX3-204ENST00000366290 GABRR2P28476 465 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 NOP14P78316 857 aaKnown RBP8.11□□□□□ -1.11
YBX3-204ENST00000366290 INCA1Q0VD86 236 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 CCDC142Q17RM4 750 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 ZNF699Q32M78 642 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 ARHGAP15Q53QZ3 475 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 ZNF667Q5HYK9 610 aa8.11□□□□□ -1.11
YBX3-204ENST00000366290 C3orf38Q5JPI3 329 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms