RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 RNF113BQ8IZP6 322 aaKnown RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 C1orf87Q8N0U7 546 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 SRBD1Q8N5C6 995 aaKnown RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 KLHDC9Q8NEP7 349 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 POF1BQ8WVV4 589 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ABTB1Q969K4 478 aaPredicted RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ZNF524Q96C55 264 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 FBXL8Q96CD0 374 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 C17orf77Q96MU5 243 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ZNF570Q96NI8 536 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 TWNKQ96RR1 684 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 FSD1Q9BTV5 496 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ESRP2Q9H6T0 727 aaKnown RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 DDX4Q9NQI0 724 aaKnown RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 TMEM30AQ9NV96 361 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 HCFC1R1Q9NWW0 138 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ALKBH4Q9NXW9 302 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 RCOR1Q9UKL0 485 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ARID4BQ4LE39 1312 aaPredicted RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 A0A0U1RQG5 324 aaPredicted RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 GOLGA6L9A6NEM1 432 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM90A7PA6NKC0 464 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 SH2D7A6NKC9 451 aaPredicted RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM90A22PA8MWA6 464 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM90A12PA8MX19 464 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM90A23PA8MXZ1 464 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 BLOC1S5-TXNDC5H3BN57 136 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 PTMAP06454 111 aaKnown RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 INHBAP08476 426 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 CYC1P08574 325 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 PATE4P0C8F1 98 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 MYOD1P15172 320 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 PAX1P15863 534 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 MCCP23508 829 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 KRT2P35908 639 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 HTR3AP46098 478 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 TBL3Q12788 808 aaKnown RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 TRIM14Q14142 442 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 CCDC96Q2M329 555 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 SIRPB2Q5JXA9 342 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 CCNYL2Q5T2Q4 361 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 GPATCH4Q5T3I0 446 aaKnown RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 ZC2HC1BQ5TFG8 222 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 SERTAD4-AS1Q5TG53 156 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 SLC35E4Q6ICL7 350 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 ANKRD54Q6NXT1 300 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 TAOK1Q7L7X3 1001 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 GPAT4Q86UL3 456 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 OR2AK2Q8NG84 335 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 ZNF354BQ96LW1 612 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 PAGR1Q9BTK6 254 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 FKRPQ9H9S5 495 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 MKKSQ9NPJ1 570 aaPredicted RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 PLCB1Q9NQ66 1216 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 RASSF1Q9NS23 344 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 SNTG1Q9NSN8 517 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 BABAM1Q9NWV8 329 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 KIF17Q9P2E2 1029 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 STON1Q9Y6Q2 735 aa2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 TP53BP1Q12888 1972 aaPredicted RBP2.28□□□□□ -2.04
RNU4-42P-201ENST00000364738 PCDH7O60245 1069 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 WDR1O75083 606 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 BAG4O95429 457 aaKnown RBP2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 MMP2P08253 660 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF10P21506 573 aaPredicted RBP2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 RRM1P23921 792 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 CORO1AP31146 461 aaKnown RBP2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 NOVP48745 357 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 TERF1P54274 439 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 HNRNPH2P55795 449 aaKnown RBP2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 GRIK3Q13003 919 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 PRKG1Q13976 671 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 VEPH1Q14D04 833 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 LPAL2Q16609 132 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 ADCK5Q3MIX3 580 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 MAP9Q49MG5 647 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 SFMBT2Q5VUG0 894 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 KCTD18Q6PI47 426 aaPredicted RBP2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 SLC35F3Q8IY50 421 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF34Q8IZ26 560 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 MAPK1IP1LQ8NDC0 245 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 VPS37AQ8NEZ2 397 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 BEST2Q8NFU1 509 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 TM9SF4Q92544 642 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 RILPL2Q969X0 211 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 BBS4Q96RK4 519 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 CD180Q99467 661 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 SYT17Q9BSW7 474 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 POLR3CQ9BUI4 534 aaPredicted RBP2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 TMEM160Q9NX00 188 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 IL1RAPL1Q9NZN1 696 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 PEMTQ9UBM1 199 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 OR2W1Q9Y3N9 320 aa2.27□□□□□ -2.05
RNU4-42P-201ENST00000364738 TMEM202A6NGA9 273 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 KLK10O43240 276 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 NR1D1P20393 614 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 AGAP20933 346 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 MAOAP21397 527 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 POU1F1P28069 291 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 BDKRB2P30411 391 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms