RNA–Protein interactions for RNA: ENST00000364065.1

RNU6-1090P-201, Transcript of RNA, U6 small nuclear 1090, pseudogene, humanhuman

BASIC

Gene RNU6-1090P, Length 94 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1090P-201ENST00000364065 NR0B1P51843 470 aaKnown RBP3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CLDN2P57739 230 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 BRWD1-AS2P59051 145 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CHRNDQ07001 517 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 PPIGQ13427 754 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 GFRALQ6UXV0 394 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TMTC1Q8IUR5 882 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 WDR63Q8IWG1 891 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CHERPQ8IWX8 916 aaKnown RBP3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ODF3L1Q8IXM7 274 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ZCCHC9Q8N567 271 aaKnown RBP3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ZNF248Q8NDW4 579 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SLC24A4Q8NFF2 622 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 DBF4BQ8NFT6 615 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 STAMQ92783 540 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 COG8Q96MW5 612 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 F2RL3Q96RI0 385 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TWNKQ96RR1 684 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 EYA3Q99504 573 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CLSTN3Q9BQT9 956 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 HAUS8Q9BT25 410 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 NUF2Q9BZD4 464 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SNTG1Q9NSN8 517 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TMEM30AQ9NV96 361 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 DDX43Q9NXZ2 648 aaKnown RBP3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TTC7AQ9ULT0 858 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 FAM96BQ9Y3D0 163 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 STON1Q9Y6Q2 735 aa3.21□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TTC36A6NLP5 189 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 PMS2P5A8MQ11 134 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 BCAT2O15382 392 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 WDR1O75083 606 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TUBBP07437 444 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 INHBAP08476 426 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 HLA-DOBP13765 273 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 PAX1P15863 534 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 AGAP20933 346 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 S1PR1P21453 382 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 GRK6P43250 576 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MMP14P50281 582 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ARL4CP56559 192 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TUBB4BP68371 445 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 PDE1BQ01064 536 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 GGNBP1Q5YKI7 109 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SLC35E4Q6ICL7 350 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 KCTD8Q6ZWB6 473 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MTSS1LQ765P7 747 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 RRM2BQ7LG56 351 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TMEM219Q86XT9 240 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SPEM1Q8N4L4 309 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CADM4Q8NFZ8 388 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 BBS10Q8TAM1 723 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CCT6BQ92526 530 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TAF15Q92804 592 aaKnown RBP eCLIP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TRIM63Q969Q1 353 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ZNF501Q96CX3 271 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MAGEE1Q9HCI5 957 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 OGFRQ9NZT2 677 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TINAGQ9UJW2 476 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 FBXO9Q9UK97 447 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 RALYQ9UKM9 306 aaKnown RBP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 FAF1Q9UNN5 650 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 LOXL2Q9Y4K0 774 aa3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 COL2A1P02458 1487 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1090P-201ENST00000364065 PDS5AQ29RF7 1337 aaKnown RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 IGKV3D-20A0A0C4DH25 116 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TMEM202A6NGA9 273 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CAVIN2O95810 425 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TBX6O95947 436 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ZNF883P0CG24 379 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MAOAP21397 527 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 GABRB2P47870 512 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 HNRNPH2P55795 449 aaKnown RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 OS9Q13438 667 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SLC12A1Q13621 1099 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 GPATCH4Q5T3I0 446 aaKnown RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TTI2Q6NXR4 508 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ARHGAP11AQ6P4F7 1023 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CEACAM20Q6UY09 585 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MYPOPQ86VE0 399 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 C1orf87Q8N0U7 546 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 CIARTQ8N365 385 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 OR10V1Q8NGI7 309 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TAS1R2Q8TE23 839 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SLC20A1Q8WUM9 679 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 RND1Q92730 232 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ABTB1Q969K4 478 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 LGALS12Q96DT0 336 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 C17orf77Q96MU5 243 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MPHOSPH6Q99547 160 aaKnown RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 PYM1Q9BRP8 204 aaKnown RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 SYT17Q9BSW7 474 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 GFRA4Q9GZZ7 299 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MKKSQ9NPJ1 570 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 HCFC1R1Q9NWW0 138 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 MAP3K20Q9NYL2 800 aaKnown RBP3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 TAGLN3Q9UI15 199 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 ERVK-11Q9UQG0 969 aa3.19□□□□□ -1.9
RNU6-1090P-201ENST00000364065 RIPOR2Q9Y4F9 1068 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms