RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 PFDN6O15212 129 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 EIF3HO15372 352 aaKnown RBP eCLIP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 HRO43593 1189 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 MAGEC1O60732 1142 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 RECQL5O94762 991 aaPredicted RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TDGF1P13385 188 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 C6P13671 934 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 HNRNPA2B1P22626 353 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 IVDP26440 423 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 MGAT1P26572 445 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CD27P26842 260 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 MAT2AP31153 395 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 HMGCLP35914 325 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 MMP12P39900 470 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 GRIA1P42261 906 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 GPR1P46091 355 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SPINT3P49223 89 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 STC1P52823 247 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TAS2R38P59533 333 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PRAMEP78395 509 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TMPRSS15P98073 1019 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PDIA2Q13087 525 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 IHHQ14623 411 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 LRRC14Q15048 493 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TEAD4Q15561 434 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 HIF1AQ16665 826 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CERCAMQ5T4B2 595 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ANKRD22Q5VYY1 191 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 LYSMD4Q5XG99 296 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 LYSMD3Q7Z3D4 306 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 RABEPKQ7Z6M1 372 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TSPAN33Q86UF1 283 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 NLRP8Q86W28 1048 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CCDC25Q86WR0 208 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TMEFF1Q8IYR6 380 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CBARPQ8N350 705 aaPredicted RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 FAM160A2Q8N612 972 aaPredicted RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ZBTB44Q8NCP5 570 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PYROXD1Q8WU10 500 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PTCD2Q8WV60 388 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 KLK6Q92876 244 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 FAM131CQ96AQ9 280 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 AP2M1Q96CW1 435 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 LRRC39Q96DD0 335 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 STAMBPL1Q96FJ0 436 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SERPINB12Q96P63 405 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 LENG8Q96PV6 779 aaPredicted RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 RANBP9Q96S59 729 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 GORASP1Q9BQQ3 440 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 C1QTNF2Q9BXJ5 285 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 MIR1-1HGQ9H1L0 117 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 DUSP15Q9H1R2 295 aaPredicted RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SEMA4AQ9H3S1 761 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 C6orf106Q9H6K1 298 aaPredicted RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 BPIFA1Q9NP55 256 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 AASDHPPTQ9NRN7 309 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PIH1D1Q9NWS0 290 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SUSD2Q9UGT4 822 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 APPL1Q9UKG1 709 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ITM2BQ9Y287 266 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 HCN4Q9Y3Q4 1203 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SLC30A1Q9Y6M5 507 aa6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SPTBN5Q9NRC6 3674 aaKnown RBP6.61□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 NYNRINQ9P2P1 1898 aaKnown RBP6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 A0A1W2PPC4 97 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 F8W8V4 182 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CACNB4O00305 520 aaPredicted RBP6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TOR1BO14657 336 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 AVILO75366 819 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TTC4O95801 387 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 POLBP06746 335 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 C1SP09871 688 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 BCKDHBP21953 392 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SPAM1P38567 509 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 C21orf59P57076 290 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 DHX9Q08211 1270 aaKnown RBP6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 RALGDSQ12967 914 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 OLIG2Q13516 323 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 THOC5Q13769 683 aaKnown RBP6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ITGA9Q13797 1035 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PTK2BQ14289 1009 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SLMAPQ14BN4 828 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CNGA3Q16281 694 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CDKN3Q16667 212 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 KCTD19Q17RG1 926 aaPredicted RBP6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 PLK5Q496M5 336 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 CCDC38Q502W7 563 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 FASTKD1Q53R41 847 aaKnown RBP6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 FNBP1LQ5T0N5 605 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 TSTD2Q5T7W7 516 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 LYPLAL1Q5VWZ2 237 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ALS2CLQ60I27 953 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 SEL1L3Q68CR1 1132 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 RAET1GQ6H3X3 334 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 Q6ZVL8 140 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
VTRNA3-1P-201ENST00000362552 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms