RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 AZIN1O14977 448 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 ATG13O75143 517 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 GCATO75600 419 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 PKMP14618 531 aaKnown RBP18.59■□□□□ 0.57
CLIP2-202ENST00000361545 JAM2P57087 298 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 GDPD5Q8WTR4 605 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 TBC1D23Q9NUY8 699 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-202ENST00000361545 PSMB9P28065 219 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 TNFRSF8P28908 595 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 EPHX4Q8IUS5 362 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 SEZ6LQ9BYH1 1024 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 MAGEH1Q9H213 219 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 TMEM216Q9P0N5 145 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 HMGXB4Q9UGU5 601 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 IQCF5A8MTL0 148 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 MT-CYBP00156 380 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-202ENST00000361545 DAW1Q8N136 415 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 HEXDCQ8WVB3 486 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 FAM83DQ9H4H8 585 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 ANKRD26Q9UPS8 1709 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 VNN1O95497 513 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 KPNB1Q14974 876 aaKnown RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 CCDC92Q53HC0 331 aaPredicted RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 MACC1Q6ZN28 852 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 C17orf64Q86WR6 236 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 AARSD1Q9BTE6 412 aaKnown RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 RAP2CQ9Y3L5 183 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 C2CD4BA6NLJ0 364 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 PRAMEF1O95521 474 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 ANXA6P08133 673 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 SNRPB2P08579 225 aaKnown RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 UQCRBP14927 111 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 MRPS22P82650 360 aaKnown RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 GAD2Q05329 585 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 HECTD2Q5U5R9 776 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 FAM20CQ8IXL6 584 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 CLP1Q92989 425 aaKnown RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 PLD4Q96BZ4 506 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 QKIQ96PU8 341 aaKnown RBP eCLIP18.58■□□□□ 0.572e-7■■■■□ 22
CLIP2-202ENST00000361545 GBA3Q9H227 469 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 ABCB8Q9NUT2 735 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 PPIEQ9UNP9 301 aaKnown RBP18.58■□□□□ 0.57
CLIP2-202ENST00000361545 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.57
CLIP2-202ENST00000361545 SLC31A1O15431 190 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 VIPP01282 170 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 NR2F1P10589 423 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 SLC25A3Q00325 362 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 GRB14Q14449 540 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 UBXN2BQ14CS0 331 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 INTS11Q5TA45 600 aaKnown RBP18.58■□□□□ 0.56
CLIP2-202ENST00000361545 ZDHHC20Q5W0Z9 365 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 TAPT1Q6NXT6 567 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 REEP1Q9H902 201 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 LRRC4CQ9HCJ2 640 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 CLDND1Q9NY35 253 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 FAM155BO75949 473 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 IDSP22304 550 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 SQLEQ14534 574 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 KLHL35Q6PF15 583 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 RTL3Q8N8U3 475 aaKnown RBP18.58■□□□□ 0.56
CLIP2-202ENST00000361545 DMAC2Q9NW81 257 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 AP4S1Q9Y587 144 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 ACTL7BQ9Y614 415 aa18.58■□□□□ 0.56
CLIP2-202ENST00000361545 FSBPO95073 299 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 POP4O95707 220 aaKnown RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 NUP107P57740 925 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 PEX6Q13608 980 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 LRRC73Q5JTD7 316 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 BHLHE22Q8NFJ8 381 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 EFR3BQ9Y2G0 817 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 HDAC3O15379 428 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 INSIG1O15503 277 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 CLOCKO15516 846 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 IFNGR2P38484 337 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ATXN7L2Q5T6C5 722 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 CAPN13Q6MZZ7 669 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ZDHHC13Q8IUH4 622 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF567Q8N184 647 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF276Q8N554 614 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 C2orf15Q8WU43 125 aaKnown RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 CD101Q93033 1021 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ERVW-1Q9UQF0 538 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 INSL6Q9Y581 213 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF536O15090 1300 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 GJA1P17302 382 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 PIK3R1P27986 724 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 DNAJB7Q7Z6W7 309 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-202ENST00000361545 DEPDC7Q96QD5 511 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 HEPHQ9BQS7 1158 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 CYLDQ9NQC7 956 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 ACSS2Q9NR19 701 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 KCTD5Q9NXV2 234 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 PEAK1Q9H792 1746 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 FFAR2O15552 330 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 FGFR3P22607 806 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 SOX6P35712 828 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 GABRB2P47870 512 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 MAPKAPK2P49137 400 aa18.57■□□□□ 0.56
CLIP2-202ENST00000361545 RNASEH2BQ5TBB1 312 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms