RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 BST2Q10589 180 aaKnown RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 PTK2BQ14289 1009 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 GRM3Q14832 879 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CCDC85BQ15834 202 aaPredicted RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 ARL13BQ3SXY8 428 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 METTL21CQ5VZV1 264 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 PCED1BQ96HM7 432 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 RANBP9Q96S59 729 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CORO1BQ9BR76 489 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 C11orf84Q9BUA3 381 aaPredicted RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 DGCR6LQ9BY27 220 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 FAM96AQ9H5X1 160 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 WDCPQ9H6R7 721 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 PARVBQ9HBI1 364 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 PLGRKTQ9HBL7 147 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 IARS2Q9NSE4 1012 aaKnown RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 WDR37Q9Y2I8 494 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 PCDHGA7Q9Y5G6 932 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 BRWD1Q9NSI6 2320 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 SLC12A8A0AV02 714 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 NEMP2A6NFY4 417 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CLIC3O95833 236 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 ZNF23P17027 643 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 AXLP30530 894 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 GPR15P49685 360 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 NUP107P57740 925 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 YBX1P67809 324 aaKnown RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 PPP1R3AQ16821 1122 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 RGS21Q2M5E4 152 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 GRTP1Q5TC63 336 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.955e-7■■■■■ 31.3
TOP1-201ENST00000361337 TBATAQ96M53 351 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 DACH2Q96NX9 599 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CYP3A43Q9HB55 503 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CDC14AQ9UNH5 594 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 PRORSD1PA6NEY8 169 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 M0R3G1 203 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 FBP2O00757 339 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 MLNP12872 115 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 HNRNPLP14866 589 aaKnown RBP eCLIP9.13□□□□□ -0.958e-7■■■■□ 21.5
TOP1-201ENST00000361337 NME5P56597 212 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 INCA1Q0VD86 236 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 TUSC3Q13454 348 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 ZFP1Q6P2D0 407 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 GET4Q7L5D6 327 aaPredicted RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 NECAB2Q7Z6G3 386 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 ADCK1Q86TW2 530 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CARM1Q86X55 608 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 FNDC8Q8TC99 324 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 NRBF2Q96F24 287 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 RMND5BQ96G75 393 aaPredicted RBP9.13□□□□□ -0.95
TOP1-201ENST00000361337 VPS39Q96JC1 886 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 PIF1Q9H611 641 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 COQ3Q9NZJ6 369 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 FAM8A1Q9UBU6 413 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 CIDEBQ9UHD4 219 aa9.13□□□□□ -0.95
TOP1-201ENST00000361337 FAM72CH0Y354 149 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 GNGT2O14610 69 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 TIPRLO75663 272 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 H6PDO95479 791 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 GJA1P17302 382 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 DDX5P17844 614 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 ALDH3B2P48448 385 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SULT2A1Q06520 285 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 FAM72AQ5TYM5 149 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 FAM72DQ6L9T8 149 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 BORAQ6PGQ7 559 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.12□□□□□ -0.951e-7■■■■□ 19.9
TOP1-201ENST00000361337 OSTM1Q86WC4 334 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 FAM72BQ86X60 149 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 FIBCD1Q8N539 461 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 FAM47BQ8NA70 645 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 DQX1Q8TE96 717 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 EXT2Q93063 718 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 ZNF597Q96LX8 424 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 OSBPL10Q9BXB5 764 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 C1QTNF1Q9BXJ1 281 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 UPF3AQ9H1J1 476 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 RAP2CQ9Y3L5 183 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 AP4S1Q9Y587 144 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 PDCD11Q14690 1871 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 H3BNH8 94 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SOCS2O14508 198 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 DLX3O60479 287 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 STMN1P16949 149 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 NMBRP28336 390 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 GABRB3P28472 473 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SPRP35270 261 aaPredicted RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 NR2C2P49116 596 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SEPHS1P49903 392 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 CDK9P50750 372 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 PLD1Q13393 1074 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 MADCAM1Q13477 382 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 TSTD2Q5T7W7 516 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SERINC5Q86VE9 423 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 MFSD6LQ8IWD5 586 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms