RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 POLR1BQ9H9Y6 1135 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 EBF2Q9HAK2 575 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 PAIP2BQ9ULR5 123 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 PSAT1Q9Y617 370 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 COMMD3-BMI1R4GMX3 469 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 RGS5O15539 181 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 ADCY6O43306 1168 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 SLC22A3O75751 556 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 HSMCR30P0CW71 290 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 CKBP12277 381 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 SLC1A2P43004 574 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
SCAF1-201ENST00000360565 FAM151BQ6UXP7 276 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 MIEF1Q9NQG6 463 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 TMCC3Q9ULS5 477 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 ELNP15502 786 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 POLD2P49005 469 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 TMED10P49755 219 aaKnown RBP16.35■□□□□ 0.21
SCAF1-201ENST00000360565 ZNF252P-AS1Q0IIN9 211 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 PARP15Q460N3 678 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 OSTM1Q86WC4 334 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 ZMAT2Q96NC0 199 aaKnown RBP16.35■□□□□ 0.21
SCAF1-201ENST00000360565 GPR21Q99679 349 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 FTHL17Q9BXU8 183 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 RERGLQ9H628 205 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 KPNA3O00505 521 aaPredicted RBP16.35■□□□□ 0.21
SCAF1-201ENST00000360565 IRAK2O43187 625 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 RECQL5O94762 991 aaPredicted RBP16.35■□□□□ 0.21
SCAF1-201ENST00000360565 WDR47O94967 919 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 TNK2Q07912 1038 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 LIN52Q52LA3 116 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 DET1Q7L5Y6 550 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 B4GALNT2Q8NHY0 566 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 RORBQ92753 470 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 ZDHHC6Q9H6R6 413 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 GNPTGQ9UJJ9 305 aa16.35■□□□□ 0.21
SCAF1-201ENST00000360565 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 OTCP00480 354 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 MRPS15P82914 257 aaKnown RBP16.34■□□□□ 0.21
SCAF1-201ENST00000360565 CNTN1Q12860 1018 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 DCTN2Q13561 401 aaKnown RBP16.34■□□□□ 0.21
SCAF1-201ENST00000360565 TXNDC11Q6PKC3 985 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 CDHR3Q6ZTQ4 885 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 ARHGAP22Q7Z5H3 698 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 GRIN3AQ8TCU5 1115 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 TWIST2Q8WVJ9 160 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PPM1MQ96MI6 270 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 OR52B2Q96RD2 323 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 HBEGFQ99075 208 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PNPLA8Q9NP80 782 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PNPLA3Q9NST1 481 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PCDHGC4Q9Y5F7 938 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PRMT5O14744 637 aaPredicted RBP16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PPP1R15BQ5SWA1 713 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 USP45Q70EL2 814 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 ADHFE1Q8IWW8 467 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 NPEPPSL1A6NEC2 478 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
SCAF1-201ENST00000360565 HTR7P34969 479 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 ACAP2Q15057 778 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 C6orf52Q5T4I8 152 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 TTC23Q5W5X9 447 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 ZBTB46Q86UZ6 589 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 SPPL2CQ8IUH8 684 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 C8orf59Q8N0T1 100 aaPredicted RBP16.34■□□□□ 0.21
SCAF1-201ENST00000360565 HOPXQ9BPY8 73 aaPredicted RBP16.34■□□□□ 0.21
SCAF1-201ENST00000360565 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
SCAF1-201ENST00000360565 PRDX6P30041 224 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 ADSLP30566 484 aaPredicted RBP16.33■□□□□ 0.21
SCAF1-201ENST00000360565 AQP4P55087 323 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 KCNA10Q16322 511 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 CCL14Q16627 93 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 RAB6CQ53S08 254 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 DEPDC1Q5TB30 811 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 KIAA0930Q6ICG6 404 aaPredicted RBP16.33■□□□□ 0.21
SCAF1-201ENST00000360565 KIAA2013Q8IYS2 634 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 FCRL5Q96RD9 977 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 MRPS26Q9BYN8 205 aaKnown RBP16.33■□□□□ 0.21
SCAF1-201ENST00000360565 RAB6CQ9H0N0 254 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 EBF3Q9H4W6 596 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 CNTN3Q9P232 1028 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 PADI4Q9UM07 663 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 E7ESA3 106 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 CLDN11O75508 207 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 C1RP00736 705 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 TACR2P21452 398 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 ALDH9A1P49189 494 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 DEFA1P59665 94 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 DEFA3P59666 94 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 UBE3AQ05086 875 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 MOGSQ13724 837 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 ATP1A4Q13733 1029 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 USP41Q3LFD5 358 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 RSPH1Q8WYR4 309 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms