RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ALPPL2P10696 532 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PWP2Q15269 919 aaKnown RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 ZC3H12AQ5D1E8 599 aaKnown RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 POLNQ7Z5Q5 900 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 IL1RAPQ9NPH3 570 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 DCKP27707 260 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PNLIPRP1P54315 467 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CDH8P55286 799 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SEC23AQ15436 765 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TRPV1Q8NER1 839 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 OR10H5Q8NGA6 315 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 DGCR6LQ9BY27 220 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 ZYG11BQ9C0D3 744 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TMEM27Q9HBJ8 222 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 DERAQ9Y315 318 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SSTR1P30872 391 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CBFBQ13951 182 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PGLYRP2Q96PD5 576 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SEMA6AQ9H2E6 1030 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 ASF1AQ9Y294 204 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 HBS1LQ9Y450 684 aaKnown RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 NCOA3Q9Y6Q9 1424 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 FAM205AQ6ZU69 1335 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3DA0A087WVF3 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3IA0A087WXS9 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3EA0A087X179 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3KA0A087X1G2 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3FA6NER0 549 aaPredicted RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3LB9A6J9 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 LCA5LO95447 670 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TGDSO95455 350 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3HP0C7X1 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 RNF43Q68DV7 783 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3GQ6DHY5 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3CQ6IPX1 549 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PYHIN1Q6K0P9 492 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D3Q8IZP1 549 aaPredicted RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 TAPBPLQ9BX59 468 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 UNKQ9C0B0 810 aaKnown RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 ANKZF1Q9H8Y5 726 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 MKL2Q9ULH7 1088 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 DCCP43146 1447 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 TRAFD1O14545 582 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 IL1BP01584 269 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 COX4I2Q96KJ9 171 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CHCHD6Q9BRQ6 235 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 DUSP16Q9BY84 665 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 SLC15A5A6NIM6 579 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SEC24AO95486 1093 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PRKAR2AP13861 404 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 FAM189A2Q15884 450 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 AMIGO1Q86WK6 493 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SLC47A1Q96FL8 570 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 EBNA1BP2Q99848 306 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 TM6SF2Q9BZW4 377 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CST11Q9H112 138 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 MAT2BQ9NZL9 334 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.68□□□□□ -0.862e-10■■■■□ 23.5
CUX1-203ENST00000360264 WNK2Q9Y3S1 2297 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 FER1L4A9Z1Z3 1794 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 WNT10BO00744 389 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 APOC1P02654 83 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 GNSP15586 552 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PTX3P26022 381 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 USP46P62068 366 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ZNF844Q08AG5 666 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 TPGS1Q6ZTW0 290 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 HIPK1Q86Z02 1210 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SLC30A8Q8IWU4 369 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 OR5T3Q8NGG3 340 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PYDC1Q8WXC3 89 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CERS2Q96G23 380 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 AARSD1Q9BTE6 412 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 HPSEQ9Y251 543 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 LRRC72A6NJI9 287 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 RARAP10276 462 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ZNF730Q6ZMV8 503 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SNX20Q7Z614 316 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ULBP1Q9BZM6 244 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 BRD9Q9H8M2 597 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 GULP1Q9UBP9 304 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 NUDT5Q9UKK9 219 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SAMD4AQ9UPU9 718 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 MDC1Q14676 2089 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 VSTM5A8MXK1 200 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 H3BNX3 289 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PGK1P00558 417 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SAGP10523 405 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 SHMT1P34896 483 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 B3GNT6Q6ZMB0 384 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 OR4L1Q8NH43 312 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 NINJ2Q9NZG7 142 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SQORQ9Y6N5 450 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ZNF879B4DU55 563 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 NR1H2P55055 460 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 RPL38P63173 70 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 BMPR2Q13873 1038 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms