RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MTCL1Q9Y4B5 1905 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TRIOBPQ9H2D6 2365 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 WDR87Q6ZQQ6 2873 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 A0A096LPK6 155 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 PABPN1LA6NDY0 278 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TM9SF1O15321 606 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 BIRC5O15392 142 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 KDELR3O43731 214 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ITM2AO43736 263 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 EDF1O60869 148 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 DNAJC8O75937 253 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 UBOX5O94941 541 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 PIGNO95427 931 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 GSRP00390 522 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 RHOP08100 348 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ALPIP09923 528 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ARRB2P32121 409 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CCNFP41002 786 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 LIMK2P53671 638 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 YBEYP58557 167 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF33AQ06730 810 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CDK18Q07002 472 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 BST1Q10588 318 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 THOC5Q13769 683 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 SEMA3AQ14563 771 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 USP10Q14694 798 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TMC5Q6UXY8 1006 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CCDC121Q6ZUS5 278 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ZC3HC1Q86WB0 502 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 C10orf107Q8IVU9 208 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 FITM2Q8N6M3 262 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 KCTD4Q8WVF5 259 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 SORCS1Q8WY21 1168 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ELMO2Q96JJ3 720 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 OMDQ99983 421 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 NSRP1Q9H0G5 558 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 MAGEH1Q9H213 219 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TLE6Q9H808 572 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TREX1Q9NSU2 369 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TSR3Q9UJK0 312 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 COL6A3P12111 3177 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 A0A0C4DFX4 3053 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TRAV19A0A0A6YYK7 116 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ILVBLA1L0T0 632 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ANTXRLA6NF34 631 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 A6NHS1 94 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CCT8L1PA6NM43 557 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 NEDD8-MDP1E9PL57 170 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 LDB2O43679 373 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 MOSPD3O75425 235 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ZMPSTE24O75844 475 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 PRLP01236 227 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 C2P06681 752 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 SERPINF2P08697 491 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 DHRS4L1P0CG22 281 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ALADP13716 330 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ALOX15P16050 662 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ALDH3A1P30838 453 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 SPRP35270 261 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 SERPINB9P50453 376 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TUBA4AP68366 448 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ACTN3Q08043 901 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 LMAN2Q12907 356 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TRAF2Q12933 501 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 DLG1Q12959 904 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CBLBQ13191 982 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 BLMHQ13867 455 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 SHHQ15465 462 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 C5orf22Q49AR2 442 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 FASTKD1Q53R41 847 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TSTD2Q5T7W7 516 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 GRTP1Q5TC63 336 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 PDPK2PQ6A1A2 396 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TRIM68Q6AZZ1 485 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 NEPROQ6NW34 567 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 NCCRP1Q6ZVX7 275 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 RPS27LQ71UM5 84 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CAMK1DQ8IU85 385 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CCNJLQ8IV13 435 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 NUDCD3Q8IVD9 361 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 KLHDC8BQ8IXV7 354 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ELMOD1Q8N336 334 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 RYBPQ8N488 228 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 PAF1Q8N7H5 531 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 MDGA1Q8NFP4 955 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 GABPB2Q8TAK5 448 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ITFG1Q8TB96 612 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TRPC4APQ8TEL6 797 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 GDPD5Q8WTR4 605 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 HERVK_113Q902F9 699 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 CCT6BQ92526 530 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 USP13Q92995 863 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ALKBH8Q96BT7 664 aaKnown RBP5.1□□□□□ -1.59
ATXN3-202ENST00000359366 ZFYVE19Q96K21 471 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 PPP1R36Q96LQ0 422 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 LRRC3BQ96PB8 259 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 OLFM1Q99784 485 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 MGME1Q9BQP7 344 aa5.1□□□□□ -1.59
ATXN3-202ENST00000359366 TSSK1BQ9BXA7 367 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms