RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PTPN5P54829 565 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 RAB2AP61019 212 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 TIGD2Q4W5G0 525 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SPATA19Q7Z5L4 167 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SP8Q8IXZ3 490 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 TNFAIP8L1Q8WVP5 186 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ISOC1Q96CN7 298 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 C1orf21Q9H246 121 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 AGO4Q9HCK5 861 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 FBXO9Q9UK97 447 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 HMGCS2P54868 508 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ACSM2AQ08AH3 577 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 TDRD10Q5VZ19 366 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 ACSM2BQ68CK6 577 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 KCNK18Q7Z418 384 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ZNF614Q8N883 585 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 BANPQ8N9N5 519 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ARFGEF2Q9Y6D5 1785 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 I3L521 148 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 CPNE3O75131 537 aaKnown RBP8.77□□□□□ -1
COL6A6-201ENST00000358511 OTCP00480 354 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 RPN2P04844 631 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 PAX3P23760 479 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 LHX1P48742 406 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 DEF8Q6ZN54 512 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 YTHDF1Q9BYJ9 559 aaKnown RBP8.77□□□□□ -1
COL6A6-201ENST00000358511 TTYH3Q9C0H2 523 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 STOX2Q9P2F5 926 aaPredicted RBP8.77□□□□□ -1
COL6A6-201ENST00000358511 PSME2Q9UL46 239 aa8.77□□□□□ -1
COL6A6-201ENST00000358511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 OR10H3O60404 316 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 GNG2P59768 71 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 FBXO42Q6P3S6 717 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 NUDT18Q6ZVK8 323 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 CYP2U1Q7Z449 544 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 NT5DC4Q86YG4 428 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 OR6J1Q8NGC5 347 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 SHC3Q92529 594 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 BIRC8Q96P09 236 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF112Q9UJU3 913 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 U3KQV3 271 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 CNTNAP2Q9UHC6 1331 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 MIA3Q5JRA6 1907 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 FAM86B1E9PN63 330 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 WWP2O00308 870 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 RPS6KA4O75676 772 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 APBA3O96018 575 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 HPGDP15428 266 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PPIBP23284 216 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 RORCP51449 518 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TKTL1P51854 596 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 POLR2JP52435 117 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 MPP1Q00013 466 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 SLC34A3Q8N130 599 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 LENG8Q96PV6 779 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ABI2Q9NYB9 513 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ISPDA4D126 451 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ASS1P00966 412 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ABCG1P45844 678 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 NDST1P52848 882 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PTGES3Q15185 160 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 BMT2Q1RMZ1 405 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PGBD2Q6P3X8 592 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TRIM40Q6P9F5 258 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 KAZALD1Q96I82 304 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 MTMR9Q96QG7 549 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PANX3Q96QZ0 392 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 GRHL1Q9NZI5 618 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 MPSTP25325 297 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TCF7P36402 384 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 SLC15A1P46059 708 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TUFMP49411 452 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TTPAP49638 278 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 NPNTQ6UXI9 565 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 SELENOMQ8WWX9 145 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TOP1MTQ969P6 601 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TRIT1Q9H3H1 467 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 TOR3AQ9H497 397 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 NXF3Q9H4D5 531 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 KLQ9UEF7 1012 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 AXIN2Q9Y2T1 843 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 PCDHB12Q9Y5F1 795 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 FAM47E-STBD1D6RA91 191 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 CLUP10909 449 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 NFKB1P19838 968 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 FMO4P31512 558 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 RFX3P48380 749 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 MAZP56270 477 aaKnown RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF613Q6PF04 617 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 C3orf67Q6ZVT6 689 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 CHPFQ8IZ52 775 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 MPP5Q8N3R9 675 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ANKRD52Q8NB46 1076 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 KBTBD7Q8WVZ9 684 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 C1GALT1C1Q96EU7 318 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1.01
COL6A6-201ENST00000358511 RACGAP1Q9H0H5 632 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 ARL15Q9NXU5 204 aa8.77□□□□□ -1.01
COL6A6-201ENST00000358511 E5RJQ4 531 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms