RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CDC14AQ9UNH5 594 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 KIAA1217Q5T5P2 1943 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 WDR27A2RRH5 827 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 IL32P24001 234 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 GLUD2P49448 558 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 LCP2Q13094 533 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 LCN1P1Q5VSP4 162 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 FKBP1CQ5VVH2 108 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 KDELC2Q7Z4H8 507 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CLYBLQ8N0X4 340 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 NKAPQ8N5F7 415 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 LENG8Q96PV6 779 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ORAI2Q96SN7 254 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TM9SF3Q9HD45 589 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SHROOM3Q8TF72 1996 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TGFB1I1O43294 461 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PSMD10O75832 226 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PSMC6P62333 389 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 NSUN2Q08J23 767 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SEMA3AQ14563 771 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MSANTD1Q6ZTZ1 278 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MRPL9Q9BYD2 267 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CCNL1Q9UK58 526 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MYOCOSA0A1B0GUC4 107 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 RBL1P28749 1068 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 EPHA3P29320 983 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 HOXA13P31271 388 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ETV4P43268 484 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CARTPTQ16568 116 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CDO1Q16878 200 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 C16orf62Q7Z3J2 963 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CBWD2Q8IUF1 395 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MROQ9BYG7 248 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ALG2Q9H553 416 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 RAVER2Q9HCJ3 691 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CISHQ9NSE2 258 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SNTG2Q9NY99 539 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 NINQ8N4C6 2090 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 FAM20BO75063 409 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLITRK3O94933 977 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 YBX3P16989 372 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 JUNBP17275 347 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ETFBP38117 255 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC15A1P46059 708 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CXCR4P61073 352 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 IL5RAQ01344 420 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 MGAT5BQ3V5L5 792 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 HACD4Q5VWC8 232 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PLET1Q6UQ28 207 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC26A9Q7LBE3 791 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PTAR1Q7Z6K3 402 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SP8Q8IXZ3 490 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PCDH20Q8N6Y1 951 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 GLT1D1Q96MS3 346 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ALPK1Q96QP1 1244 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC9A7Q96T83 725 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 POPDC2Q9HBU9 364 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TRMT13Q9NUP7 481 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 DNAJB9Q9UBS3 223 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ASB4Q9Y574 426 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SCN8AQ9UQD0 1980 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PROM1O43490 865 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ICMTO60725 284 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TNFRSF21O75509 655 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ALDH1A2O94788 518 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PRKCDQ05655 676 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 UBAP2Q5T6F2 1119 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PLA2G4FQ68DD2 849 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CNSTQ6PJW8 725 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 OTOP1Q7RTM1 612 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 IGFN1Q86VF2 1251 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 REPS1Q96D71 796 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CHCHD6Q9BRQ6 235 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CLPBQ9H078 707 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 RANBP3Q9H6Z4 567 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 WDR81Q562E7 1941 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PIAS1O75925 651 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PLCL1Q15111 1095 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 KIF18BQ86Y91 864 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 RASAL3Q86YV0 1011 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PCDHB18PQ96TA0 734 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CTRCQ99895 268 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TMEM168Q9H0V1 697 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PDGFCQ9NRA1 345 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ENPP5Q9UJA9 477 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 GNB5O14775 395 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 USP12O75317 370 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC22A3O75751 556 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 RPS5P46782 204 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CLK3P49761 638 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC7A2P52569 658 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC6A3Q01959 620 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PMS2P3Q13401 168 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 IFNLR1Q8IU57 520 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CACTIN-AS1Q8N1I8 211 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TMEM199Q8N511 208 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms