RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ODC1P11926 461 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 PFKPQ01813 784 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 FRG1Q14331 258 aaKnown RBP15.27■□□□□ 0.04
PTBP1-203ENST00000356948 PFKFB4Q16877 469 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 RTL3Q8N8U3 475 aaKnown RBP15.27■□□□□ 0.04
PTBP1-203ENST00000356948 RDH11Q8TC12 318 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 AKTIPQ9H8T0 292 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 SLAMF8Q9P0V8 285 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 GMIPQ9P107 970 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 DNAJC15Q9Y5T4 150 aa15.27■□□□□ 0.04
PTBP1-203ENST00000356948 S1PR4O95977 384 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 APOA4P06727 396 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 TFPTP0C1Z6 253 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 ATP6V1B2P21281 511 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 MAPK10P53779 464 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 PRAMEP78395 509 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 GEN1Q17RS7 908 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 UNC50Q53HI1 259 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 SPATA2LQ8IUW3 424 aaPredicted RBP15.27■□□□□ 0.03
PTBP1-203ENST00000356948 TUBB1Q9H4B7 451 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 TRPV2Q9Y5S1 764 aa15.27■□□□□ 0.03
PTBP1-203ENST00000356948 SAC3D1A6NKF1 404 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 NR5A2O00482 541 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 SOCS2O14508 198 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 DENRO43583 198 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 GPC4O75487 556 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 ASLP04424 464 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 GRIA3P42263 894 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 SERPINH1P50454 418 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 GEMP55040 296 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 TRIM25Q14258 630 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 POTEHQ6S545 545 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 IFNEQ86WN2 208 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 ZBED2Q9BTP6 218 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 ENTPD7Q9NQZ7 604 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 VTI1BQ9UEU0 232 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 AP4S1Q9Y587 144 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 RAD54BQ9Y620 910 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 A0A0D9SEW6 157 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 ENPP3O14638 875 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 H2AFYO75367 372 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 SEC24DO94855 1032 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 LTA4HP09960 611 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 DIO3P55073 304 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 MLLT6P55198 1093 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 MS4A13Q5J8X5 152 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 PIWIL4Q7Z3Z4 852 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 SPPL2CQ8IUH8 684 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 VPS33AQ96AX1 596 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 PPWD1Q96BP3 646 aaKnown RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 UBXN10Q96LJ8 280 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 CAAP1Q9H8G2 361 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 MAP10Q9P2G4 905 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 ASB1Q9Y576 335 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 M0QZ92 97 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 MRASO14807 208 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 SH3BGRP55822 239 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 LSAMPQ13449 338 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 ATP1A4Q13733 1029 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 PCBP1Q15365 356 aaKnown RBP eCLIP15.26■□□□□ 0.034e-7■■□□□ 13.1
PTBP1-203ENST00000356948 UGP2Q16851 508 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 KIAA0930Q6ICG6 404 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-203ENST00000356948 TRPC4APQ8TEL6 797 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 CCDC28BQ9BUN5 200 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 CRISPLD1Q9H336 500 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 AURKCQ9UQB9 309 aa15.26■□□□□ 0.03
PTBP1-203ENST00000356948 TRIM24O15164 1050 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 LDB2O43679 373 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MTHFD1P11586 935 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MAGEA8P43361 318 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 NAA20P61599 178 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 CAP1Q01518 475 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 POU4F1Q01851 419 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 B3GNT6Q6ZMB0 384 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 CHSY3Q70JA7 882 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 BTBD9Q96Q07 612 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 ABCC13Q9NSE7 274 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 EPS15L1Q9UBC2 864 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MIA3Q5JRA6 1907 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 TRIM38O00635 465 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 GOT2P00505 430 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 NCK1P16333 377 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 CAPN3P20807 821 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 OXTRP30559 389 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 HOXC8P31273 242 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 AGTR2P50052 363 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 PLIN5Q00G26 463 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 DCTN2Q13561 401 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 KIF19Q2TAC6 998 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 UGT3A2Q3SY77 523 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 HABP4Q5JVS0 413 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MAP3K21Q5TCX8 1036 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 FBXL22Q6P050 247 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 PTGR2Q8N8N7 351 aaPredicted RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 IMP4Q96G21 291 aaKnown RBP15.25■□□□□ 0.03
PTBP1-203ENST00000356948 HAPLN3Q96S86 360 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 SLC30A3Q99726 388 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 MEAF6Q9HAF1 191 aa15.25■□□□□ 0.03
PTBP1-203ENST00000356948 SEMA4BQ9NPR2 832 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms