RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ACLYP53396 1101 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 RAB25P57735 213 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 SPIBQ01892 262 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 CNTN2Q02246 1040 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 CERCAMQ5T4B2 595 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ARHGEF19Q8IW93 802 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 RASGEF1CQ8N431 466 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 MAGEE2Q8TD90 523 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 MCMBPQ9BTE3 642 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 MMADHCQ9H3L0 296 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 PTGFRNQ9P2B2 879 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ST3GAL5Q9UNP4 418 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 DIP2BQ9P265 1576 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PTPRJQ12913 1337 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 RNF225M0QZC1 329 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF208O43345 1280 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SIN3BO75182 1162 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CCNB2O95067 398 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM228BP0C875 321 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GABRR2P28476 465 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 HNF4AP41235 474 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CLCN2P51788 898 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SEC13P55735 322 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 RRP1BQ14684 758 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SEC23AQ15436 765 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM183BPQ6ZVS7 135 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TSTD1Q8NFU3 115 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 HERVK_113Q902F9 699 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 LPPQ93052 612 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FATE1Q969F0 183 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 C11orf84Q9BUA3 381 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CHMP1AQ9HD42 196 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ETNK2Q9NVF9 386 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 IKZF3Q9UKT9 509 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 NALCNQ8IZF0 1738 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FFAR3O14843 346 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GPR42O15529 346 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SLC28A2O43868 658 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PCCBP05166 539 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CMPK1P30085 196 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GALNT3Q14435 633 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TMEM119Q4V9L6 283 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 COLEC12Q5KU26 742 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TMEM164Q5U3C3 297 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF571Q7Z3V5 609 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SNX32Q86XE0 403 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 HPS6Q86YV9 775 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 DRAXINQ8NBI3 349 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 OR2L5Q8NG80 312 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 COPS8Q99627 209 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 IL12RB2Q99665 862 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 SEMA6BQ9H3T3 888 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 DUS2Q9NX74 493 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GMIPQ9P107 970 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ARMCX1Q9P291 453 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 C2CD2Q9Y426 696 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PCDHGB5Q9Y5G0 923 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 DYTNA2CJ06 578 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 KPNA4O00629 521 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 KLRC4O43908 158 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CLDN11O75508 207 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GATBO75879 557 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 OR5F1O95221 314 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 TNFAIP8O95379 198 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 LPOP22079 712 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ME2P23368 584 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 MIPP30301 263 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ATXN1P54253 815 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PTENP60484 403 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 MBTD1Q05BQ5 628 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM153CQ494X1 144 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 VPS26BQ4G0F5 336 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZCCHC7Q8N3Z6 543 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ZBTB2Q8N680 514 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM81AQ8TBF8 368 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 HSFY1Q96LI6 401 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GPER1Q99527 375 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 MRPL57Q9BQC6 102 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PCDH12Q9NPG4 1184 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 NDRG2Q9UN36 371 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PSMD13Q9UNM6 376 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 ERGIC3Q9Y282 383 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 MAFO75444 373 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GJB6O95452 261 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 EPHX1P07099 455 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PSMB4P28070 264 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 DNASE1L1P49184 302 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 VBP1P61758 197 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PRR23BQ6ZRT6 265 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PIK3C3Q8NEB9 887 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 CLP1Q92989 425 aaKnown RBP5.54□□□□□ -1.52
PTPRD-202ENST00000356435 PCDHB11Q9Y5F2 797 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 FAM205AQ6ZU69 1335 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 GLYATL1P3A0A0U1RQE8 302 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 VSTM5A8MXK1 200 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 H0YGN5 161 aa5.54□□□□□ -1.52
PTPRD-202ENST00000356435 KCNK1O00180 336 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms