RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CDKN2AIPNLQ96HQ2 116 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 C7orf26Q96N11 449 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 FAM167BQ9BTA0 163 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 TBC1D10AQ9BXI6 508 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 COMMD8Q9NX08 183 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 GTSE1Q9NYZ3 720 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 WNT6Q9Y6F9 365 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 RASSF9O75901 435 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 CA5AP35218 305 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 MXRA7P84157 204 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 C1QTNF12Q5T7M4 302 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 TRIM68Q6AZZ1 485 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 OR4L1Q8NH43 312 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 NUDCD1Q96RS6 583 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 MIPEPQ99797 713 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 ARNT2Q9HBZ2 717 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 TNFRSF12AQ9NP84 129 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 ZDHHC2Q9UIJ5 367 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 LSM7Q9UK45 103 aaKnown RBP17.65■□□□□ 0.42
NPAS3-202ENST00000356141 INSL6Q9Y581 213 aa17.65■□□□□ 0.42
NPAS3-202ENST00000356141 PLXNA4Q9HCM2 1894 aa17.64■□□□□ 0.42
NPAS3-202ENST00000356141 ANKRD36A6QL64 1941 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 AP3B1O00203 1094 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 BIRC5O15392 142 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 TRIM13O60858 407 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 MAGEA12P43365 314 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 UGP2Q16851 508 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 FAM151BQ6UXP7 276 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 LYSMD3Q7Z3D4 306 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 WDR75Q8IWA0 830 aaKnown RBP17.64■□□□□ 0.41
NPAS3-202ENST00000356141 TRIM42Q8IWZ5 723 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 KLHDC8BQ8IXV7 354 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 ELMOD1Q8N336 334 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 DCBLD1Q8N8Z6 715 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 OR52B2Q96RD2 323 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 TRIB3Q96RU7 358 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 PRKD2Q9BZL6 878 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 COG4Q9H9E3 785 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 CATSPERZQ9NTU4 200 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 UTP6Q9NYH9 597 aaKnown RBP17.64■□□□□ 0.41
NPAS3-202ENST00000356141 SLCO3A1Q9UIG8 710 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 INTS6Q9UL03 887 aaKnown RBP17.64■□□□□ 0.41
NPAS3-202ENST00000356141 TBC1D30Q9Y2I9 924 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 VWA7Q9Y334 891 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 PPP6CO00743 305 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 SIX3O95343 332 aaPredicted RBP17.64■□□□□ 0.41
NPAS3-202ENST00000356141 FGF1P05230 155 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 ESRRAP11474 423 aaPredicted RBP17.64■□□□□ 0.41
NPAS3-202ENST00000356141 TFEBP19484 476 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 CCDC153Q494R4 210 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 ARMC12Q5T9G4 340 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 KLHDC10Q6PID8 442 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 TMC5Q6UXY8 1006 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 GRIN3AQ8TCU5 1115 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 BRSK1Q8TDC3 778 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 OVCA2Q8WZ82 227 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 FEM1CQ96JP0 617 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 ZFYVE19Q96K21 471 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 SLC30A3Q99726 388 aa17.64■□□□□ 0.41
NPAS3-202ENST00000356141 DNMT3BQ9UBC3 853 aaKnown RBP17.64■□□□□ 0.41
NPAS3-202ENST00000356141 ANTXRLA6NF34 631 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 MC4RP32245 332 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 AP1ARQ63HQ0 302 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 ASTLQ6HA08 431 aaPredicted RBP17.63■□□□□ 0.41
NPAS3-202ENST00000356141 PARP9Q8IXQ6 854 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 HJURPQ8NCD3 748 aaPredicted RBP17.63■□□□□ 0.41
NPAS3-202ENST00000356141 EID2BQ96D98 161 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 GCNAQ96QF7 691 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 LHX3Q9UBR4 397 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 TRAV19A0A0A6YYK7 116 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 ANKRD66B4E2M5 251 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 KLF11O14901 512 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 DCXO43602 365 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 NIPSNAP2O75323 286 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 HLA-DPA1P20036 260 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 IDH3AP50213 366 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 IRX1P78414 480 aaPredicted RBP17.63■□□□□ 0.41
NPAS3-202ENST00000356141 NSUN2Q08J23 767 aaKnown RBP eCLIP17.63■□□□□ 0.414e-6■■■■□ 26.5
NPAS3-202ENST00000356141 PABPC1LQ4VXU2 614 aaKnown RBP17.63■□□□□ 0.41
NPAS3-202ENST00000356141 MFSD4BQ5TF39 518 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 ARMC3Q5W041 872 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 RFLNAQ6ZTI6 216 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 CNTN4Q8IWV2 1026 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 PHTF2Q8N3S3 785 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 GBP7Q8N8V2 638 aaPredicted RBP17.63■□□□□ 0.41
NPAS3-202ENST00000356141 CYB5D2Q8WUJ1 264 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 GPR78Q96P69 363 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 GPR63Q9BZJ6 419 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 IGSF5Q9NSI5 407 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 TXLNGQ9NUQ3 528 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 FAM8A1Q9UBU6 413 aa17.63■□□□□ 0.41
NPAS3-202ENST00000356141 RPP40O75818 363 aaKnown RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 UGT1A6P19224 532 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 UGT1A1P22309 533 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 UGT1A4P22310 534 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 HLA-FP30511 346 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 UGT1A3P35503 534 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 UGT1A5P35504 534 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 CCNHP51946 323 aaPredicted RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 DGKKQ5KSL6 1271 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms