RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DEFA3P59666 94 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 LSM3P62310 102 aaKnown RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 DARS2Q6PI48 645 aaKnown RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 TRPV3Q8NET8 790 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 CRYGNQ8WXF5 182 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 GATA5Q9BWX5 397 aaPredicted RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 RHOBTB2Q9BYZ6 727 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ASPSCR1Q9BZE9 553 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 TRIM15Q9C019 465 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ZNF358Q9NW07 568 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 OSGIN1Q9UJX0 560 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 SNX5Q9Y5X3 404 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 HMX3A6NHT5 357 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 KPNA7A9QM74 516 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ACSL4O60488 711 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 PDGFAP04085 211 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 PCNAP12004 261 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ACVR2AP27037 513 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 PIGHQ14442 188 aaPredicted RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 ARHGEF16Q5VV41 709 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 FAM45BPQ6NSW5 357 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ZNF767PQ75MW2 155 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 THNSL1Q8IYQ7 743 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ABRAQ8N0Z2 381 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 EID3Q8N140 333 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 NAT16Q8N8M0 369 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 SMG8Q8ND04 991 aaKnown RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 FAM45AQ8TCE6 357 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 KIFC1Q9BW19 673 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 EPS8L2Q9H6S3 715 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 ZFP14Q9HCL3 533 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 INTS10Q9NVR2 710 aaKnown RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 DTLQ9NZJ0 730 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 PCSK1NQ9UHG2 260 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 PDE10AQ9Y233 779 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 SLCO1B7G3V0H7 640 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 H3BMM5 538 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 AP3D1O14617 1153 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 PSKH1P11801 424 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 IL7RP16871 459 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 MAGEA3P43357 314 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 BNC1Q01954 994 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 PIGFQ07326 219 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 MAPRE2Q15555 327 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 FAM214AQ32MH5 1076 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 PLA2G4EQ3MJ16 856 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 PARP15Q460N3 678 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 USP50Q70EL3 339 aaPredicted RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 LINC00518Q8N0U6 118 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 LRRC47Q8N1G4 583 aaKnown RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 YIPF6Q96EC8 236 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 HSD17B14Q9BPX1 270 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 MMP27Q9H306 513 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 ZNF556Q9HAH1 456 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 RAVER2Q9HCJ3 691 aaKnown RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 TUFT1Q9NNX1 390 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 GLTPQ9NZD2 209 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 PAK5Q9P286 719 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 CCDC78A2IDD5 438 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 KRT87PA6NCN2 255 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 ZBBXA8MT70 800 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 CAPN5O15484 640 aaPredicted RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 ATF6P18850 670 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 PRDX5P30044 214 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 RFC2P35250 354 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 MAGEA6P43360 314 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 C6orf141Q5SZD1 244 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 ADGRF4Q8IZF3 695 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 DACT3Q96B18 629 aaPredicted RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 FAM84BQ96KN1 310 aaPredicted RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 IFT22Q9H7X7 185 aa15.75■□□□□ 0.11
RTN3-205ENST00000356000 GMPR2Q9P2T1 348 aaKnown RBP15.75■□□□□ 0.11
RTN3-205ENST00000356000 PI15O43692 258 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 CPNE3O75131 537 aaKnown RBP15.74■□□□□ 0.11
RTN3-205ENST00000356000 SRP72O76094 671 aaKnown RBP15.74■□□□□ 0.11
RTN3-205ENST00000356000 RBP1P09455 135 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 GGT5P36269 586 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 SLC7A2P52569 658 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 ROR1Q01973 937 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 ZNF45Q02386 682 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 GPR50Q13585 617 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 MFSD10Q14728 455 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 HACD2Q6Y1H2 254 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 P2RY8Q86VZ1 359 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 FBXO11Q86XK2 927 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 SPPL2CQ8IUH8 684 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 NIPA2Q8N8Q9 360 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 SPATA18Q8TC71 538 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 ZFAND1Q8TCF1 268 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 FAR1Q8WVX9 515 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 ERVMER34-1Q9H9K5 563 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 RSAD1Q9HA92 442 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 OPTCQ9UBM4 332 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 NUDT5Q9UKK9 219 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 TTC24A2A3L6 582 aaPredicted RBP15.74■□□□□ 0.11
RTN3-205ENST00000356000 WTIPA6NIX2 430 aaPredicted RBP15.74■□□□□ 0.11
RTN3-205ENST00000356000 K7ENM7 598 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 TOR1AO14656 332 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 SSX4O60224 188 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms