RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 DEFB106AQ8N104 65 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 CLIP4Q8N3C7 705 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 FKBP10Q96AY3 582 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 SLC30A3Q99726 388 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 GTF2IRD1Q9UHL9 959 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 PCNTO95613 3336 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 TTC24A2A3L6 582 aaPredicted RBP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 ATICP31939 592 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 NR4A2P43354 598 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 ARCN1P48444 511 aaKnown RBP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 UGT3A2Q3SY77 523 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 PAGE2BQ5JRK9 111 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 LARP4Q71RC2 724 aaKnown RBP eCLIP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 SLC22A16Q86VW1 577 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 DNERQ8NFT8 737 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 SLC22A17Q8WUG5 538 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 YTHDF1Q9BYJ9 559 aaKnown RBP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 ANKMY1Q9P2S6 941 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 ABCD2Q9UBJ2 740 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 KLHL3Q9UH77 587 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 ZNF229Q9UJW7 825 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FAM72CH0Y354 149 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 HUS1O60921 280 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 BAG6P46379 1132 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 CLCN3P51790 818 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FPGSQ05932 587 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 LAMC2Q13753 1193 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 TMEM132DQ14C87 1099 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FAM72AQ5TYM5 149 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 KCTD11Q693B1 232 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FAM72DQ6L9T8 149 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 VASH1Q7L8A9 365 aaPredicted RBP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FAM72BQ86X60 149 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 FAR2Q96K12 515 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 WDR12Q9GZL7 423 aaKnown RBP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 AKTIPQ9H8T0 292 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 SCUBE2Q9NQ36 999 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 RNF19AQ9NV58 838 aa18.92■□□□□ 0.62
PRPF39-201ENST00000355765 ZNF646O15015 1829 aaPredicted RBP18.92■□□□□ 0.62
PRPF39-201ENST00000355765 EEF2KO00418 725 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 PPEF2O14830 753 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 KPNA6O60684 536 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 ADAM17P78536 824 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 SLC10A6Q3KNW5 377 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 EXOC8Q8IYI6 725 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 EFHD2Q96C19 240 aaPredicted RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 DHRS1Q96LJ7 313 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 RNF145Q96MT1 663 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 EML4Q9HC35 981 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 SLC2A6Q9UGQ3 507 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 ANAPC2Q9UJX6 822 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 INMTO95050 263 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 C7P10643 843 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 HSD17B1P14061 328 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 CASP2P42575 452 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 LEPRP48357 1165 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 GSK3BP49841 420 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 CDH13P55290 713 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 BNIP2Q12982 314 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 TUBA3CQ13748 450 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 PSMD5Q16401 504 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 RBM20Q5T481 1227 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 ESRP1Q6NXG1 681 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 PRR23BQ6ZRT6 265 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 ZCCHC7Q8N3Z6 543 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 NACA2Q9H009 215 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 INTS10Q9NVR2 710 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 DPP3Q9NY33 737 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 BAG5Q9UL15 447 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 KIAA1257Q9ULG3 409 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 SHROOM3Q8TF72 1996 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 IPO13O94829 963 aaKnown RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 S100BP04271 92 aaPredicted RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 HTR1AP08908 422 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 ALOX5P09917 674 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 PCNAP12004 261 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 BMP4P12644 408 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 CRHBPP24387 322 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 SLC1A2P43004 574 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 SLC12A2P55011 1212 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 MXD4Q14582 209 aaPredicted RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 TMEM236Q5W0B7 351 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 HTRA1Q92743 480 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 LRRC58Q96CX6 371 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 C19orf60Q96EN9 201 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 TMEM74Q96NL1 305 aa18.91■□□□□ 0.62
PRPF39-201ENST00000355765 HOPXQ9BPY8 73 aaPredicted RBP18.91■□□□□ 0.62
PRPF39-201ENST00000355765 IGKV6D-21A0A0A0MT36 114 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 ZBBXA8MT70 800 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 SUPT7LO94864 414 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 GPIP06744 558 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 FCGR1AP12314 374 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 TCF3P15923 654 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 NPY2RP49146 381 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 TPD52P55327 224 aaPredicted RBP18.9■□□□□ 0.62
PRPF39-201ENST00000355765 GRB7Q14451 532 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 STXBP2Q15833 593 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 MEP1AQ16819 746 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 BTBD8Q5XKL5 378 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms