RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 RAD51AP1Q96B01 352 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ITCHQ96J02 903 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ABCG4Q9H172 646 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ACSS3Q9H6R3 686 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PTGFRNQ9P2B2 879 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 COL1A2P08123 1366 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 FSCN2O14926 492 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 SLC25A24Q6NUK1 477 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PPCDCQ96CD2 204 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 BTN2A3PQ96KV6 586 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 MCMBPQ9BTE3 642 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 GPN3Q9UHW5 284 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 EVLQ9UI08 416 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 SORCS3Q9UPU3 1222 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 STON1Q9Y6Q2 735 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 FAM237AA0A1B0GTK4 181 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 UGT2B4P06133 528 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 MAPKAPK2P49137 400 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 UGT2B15P54855 530 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 FKBP1BP68106 108 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PDK4Q16654 411 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 POTEHQ6S545 545 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 OTOP2Q7RTS6 562 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 KREMEN1Q96MU8 473 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 CPXM1Q96SM3 734 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 SGK2Q9HBY8 427 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-202ENST00000355133 PADI3Q9ULW8 664 aa13.23□□□□□ -0.29
SCN8A-202ENST00000355133 CLDN11O75508 207 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 C1RP00736 705 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 APODP05090 189 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 LAG3P18627 525 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 CCNA2P20248 432 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 NAA20P61599 178 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 SULT2A1Q06520 285 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 USP4Q13107 963 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 PRKG2Q13237 762 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 PMF1Q6P1K2 205 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 XYLT1Q86Y38 959 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 ZNF398Q8TD17 642 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 FANCEQ9HB96 536 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 ADGRB1O14514 1584 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 ERN1O75460 977 aaKnown RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 STBD1O95210 358 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 MYBL2P10244 700 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 BMP7P18075 431 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 MYBPC1Q00872 1141 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 NRG1Q02297 640 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 DLG2Q15700 870 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 KLHL12Q53G59 568 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 LINGO4Q6UY18 593 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 OR4K2Q8NGD2 314 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 FGFBP2Q9BYJ0 223 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 EPB41L1Q9H4G0 881 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 CIDEBQ9UHD4 219 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 WARSP23381 471 aaKnown RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 PSMD7P51665 324 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 TOP3AQ13472 1001 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 LSM12Q3MHD2 195 aaKnown RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 KCTD21Q4G0X4 260 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 AADATQ8N5Z0 425 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 CD99L2Q8TCZ2 262 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 KLHL31Q9H511 634 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 ACSS2Q9NR19 701 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 EGFL7Q9UHF1 273 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 GLYATL1P3A0A0U1RQE8 302 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 SLC5A3P53794 718 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 AIF1P55008 147 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 MANFP55145 182 aaKnown RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 MPPE1Q53F39 396 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 RNF43Q68DV7 783 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 MZT2AQ6P582 158 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-202ENST00000355133 ANKRD27Q96NW4 1050 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 CDH19Q9H159 772 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 SLC28A3Q9HAS3 691 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 SAMHD1Q9Y3Z3 626 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms