RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 VPS39Q96JC1 886 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 GATA5Q9BWX5 397 aaPredicted RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 ADNPQ9H2P0 1102 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TRIT1Q9H3H1 467 aaKnown RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 WDR41Q9HAD4 459 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 SQORQ9Y6N5 450 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TTC3P53804 2025 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 MEN1O00255 615 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 CRYZL1O95825 349 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 MT-CYBP00156 380 aaPredicted RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 MYL3P08590 195 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 ME2P23368 584 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 CD68P34810 354 aaPredicted RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 GLUD2P49448 558 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 CTBP1Q13363 440 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 IRF5Q13568 498 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 USP10Q14694 798 aaKnown RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 GRM3Q14832 879 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 GRTP1Q5TC63 336 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 DCLRE1AQ6PJP8 1040 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 ZCCHC7Q8N3Z6 543 aaKnown RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 PSMA8Q8TAA3 256 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 KCTD4Q8WVF5 259 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 ALPK1Q96QP1 1244 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 MLPHQ9BV36 600 aaPredicted RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 CCDC90BQ9GZT6 254 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 IL1RL2Q9HB29 575 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 FANCEQ9HB96 536 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 NMRAL1Q9HBL8 299 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 TLK1Q9UKI8 766 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 SLC8A2Q9UPR5 921 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 DOCK3Q8IZD9 2030 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 COL1A2P08123 1366 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 CTSHP09668 335 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 LIMK2P53671 638 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 PRKAA2P54646 552 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 PTK2BQ14289 1009 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 MAPRE1Q15691 268 aaKnown RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 CCL15Q16663 113 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 INAVAQ3KP66 663 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 SPANXN3Q5MJ09 141 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 ATAD3BQ5T9A4 648 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 DHRS4L2Q6PKH6 230 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 ARHGAP36Q6ZRI8 547 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 GPR142Q7Z601 462 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 RNF135Q8IUD6 432 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 NATD1Q8N6N6 113 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 C2orf69Q8N8R5 385 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 IPMKQ8NFU5 416 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 NPLOC4Q8TAT6 608 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 HDAC2Q92769 488 aaKnown RBP9.4□□□□□ -0.9
SMG6-202ENST00000354901 ACDQ96AP0 544 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 TINF2Q9BSI4 451 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 NAT9Q9BTE0 207 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 TKTL2Q9H0I9 626 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 CRTAC1Q9NQ79 661 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 TCF7L2Q9NQB0 619 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 UCKL1Q9NWZ5 548 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 DERAQ9Y315 318 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 SPEF1Q9Y4P9 236 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 BRCA2P51587 3418 aa9.4□□□□□ -0.9
SMG6-202ENST00000354901 ZCWPW2A0A1B0GU75 182 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 CASTOR2A6NHX0 329 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 DCLK1O15075 740 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 ASNA1O43681 348 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 TRIM13O60858 407 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 BMP10O95393 424 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 PIGNO95427 931 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 AP2A1O95782 977 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 KRT8P05787 483 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 PIK3R1P27986 724 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 DPYSQ14117 519 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 ZIK1Q3SY52 487 aaPredicted RBP9.4□□□□□ -0.91
SMG6-202ENST00000354901 PAGE2BQ5JRK9 111 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 CEP78Q5JTW2 689 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 ALKAL1Q6UXT8 129 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 HERC6Q8IVU3 1022 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 CCDC103Q8IW40 242 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 DENND6AQ8IWF6 608 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 CBR4Q8N4T8 237 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 SENP8Q96LD8 212 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 KATNBL1Q9H079 304 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 IRF2BPLQ9H1B7 796 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 OR12D3Q9UGF7 316 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 UGT2A1Q9Y4X1 527 aa9.4□□□□□ -0.91
SMG6-202ENST00000354901 SOBPA7XYQ1 873 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 ZNF487B1APH4 448 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 TMEM233B4DJY2 109 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 G3V2L1 256 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 ZNF195O14628 629 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 CLOCKO15516 846 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 HTRA2O43464 458 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 MT-CO1P00395 513 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 JUNP05412 331 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 SNAP47Q5SQN1 464 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 C16orf89Q6UX73 402 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 SLC41A1Q8IVJ1 513 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms