RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 C1QTNF8P60827 252 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 CEACAM7Q14002 265 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 GIPC2Q8TF65 315 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 BTBD9Q96Q07 612 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 PSKH2Q96QS6 385 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 TTPALQ9BTX7 342 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 GREB1Q4ZG55 1949 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 PSMD12O00232 456 aaPredicted RBP22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 BCAS2O75934 225 aaPredicted RBP22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 PSMD8P48556 350 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 MED21Q13503 144 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 LRRC36Q1X8D7 754 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 SFT2D3Q587I9 215 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 RTP2Q5QGT7 225 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 OGFRL1Q5TC84 451 aaPredicted RBP22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 IL31Q6EBC2 164 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 ZNF549Q6P9A3 640 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 CLYBLQ8N0X4 340 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 PDZD8Q8NEN9 1154 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 DBF4BQ8NFT6 615 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 TRIB3Q96RU7 358 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 MRPL9Q9BYD2 267 aaKnown RBP22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 EBF3Q9H4W6 596 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 SYTL2Q9HCH5 934 aa22.27■■□□□ 1.16
NKX2-1-201ENST00000354822 XRCC1P18887 633 aaPredicted RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 PEX2P28328 305 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 KCNC1P48547 511 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 ATP4BP51164 291 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 BFSP2Q13515 415 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 FASTKQ14296 549 aaKnown RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 GALNT3Q14435 633 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 TYSND1Q2T9J0 566 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 CFAP52Q8N1V2 620 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 PNPLA1Q8N8W4 532 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 ICA1LQ8NDH6 482 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 OVCA2Q8WZ82 227 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 CDKN2AIPNLQ96HQ2 116 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 NPAS2Q99743 824 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 SEZ6LQ9BYH1 1024 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 TFB2MQ9H5Q4 396 aaKnown RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 NLE1Q9NVX2 485 aaPredicted RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 UBA2Q9UBT2 640 aaPredicted RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 A0A0D9SEW6 157 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 KDELR3O43731 214 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 GJB3O75712 270 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 SLC4A1P02730 911 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 FGF4P08620 206 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 HOXD9P28356 352 aaPredicted RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 ALDH1A3P47895 512 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 STC1P52823 247 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 PTK2BQ14289 1009 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 MMEL1Q495T6 779 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 UNC50Q53HI1 259 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 PIM3Q86V86 326 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 CATSPER1Q8NEC5 780 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 OR52K2Q8NGK3 314 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 OR13C4Q8NGS5 318 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 TMA16Q96EY4 203 aaKnown RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 AARSD1Q9BTE6 412 aaKnown RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 CINPQ9BW66 212 aaPredicted RBP22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 TNFRSF12AQ9NP84 129 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 EPS15L1Q9UBC2 864 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 PACSIN3Q9UKS6 424 aa22.26■■□□□ 1.15
NKX2-1-201ENST00000354822 TRIM38O00635 465 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 NBNO60934 754 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 CLDN11O75508 207 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 GALTP07902 379 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 ZNF37AP17032 561 aaPredicted RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 SLC6A4P31645 630 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 TUFMP49411 452 aaKnown RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 PKNOX1P55347 436 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 PDAP1Q13442 181 aaKnown RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 KLHDC10Q6PID8 442 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 PIP4K2CQ8TBX8 421 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 PTERQ96BW5 349 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 LRGUKQ96M69 825 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 TCF12Q99081 682 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 NACA2Q9H009 215 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 SARDHQ9UL12 918 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 ZFP37Q9Y6Q3 630 aaPredicted RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 UBFD1O14562 309 aaKnown RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 SNRPB2P08579 225 aaKnown RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 ACADVLP49748 655 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 OXCT1P55809 520 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 PSME3P61289 254 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 TIAL1Q01085 375 aaKnown RBP eCLIP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 ARHGEF6Q15052 776 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 GK5Q6ZS86 529 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 LARP4Q71RC2 724 aaKnown RBP eCLIP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 SEPT8Q92599 483 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 USP13Q92995 863 aaPredicted RBP22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 SLC25A23Q9BV35 468 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 UNC93B1Q9H1C4 597 aa22.25■■□□□ 1.15
NKX2-1-201ENST00000354822 UBTFL6P0CB48 400 aaPredicted RBP22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 VCLP18206 1134 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 ATF6P18850 670 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 DPP6P42658 865 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 PRMT2P55345 433 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 AGKQ53H12 422 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 RARS2Q5T160 578 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms