RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 TCAF1Q9Y4C2 921 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TEX264Q9Y6I9 313 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 PLXND1Q9Y4D7 1925 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3DA0A087WVF3 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3IA0A087WXS9 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3EA0A087X179 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3KA0A087X1G2 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 MAGEB16A2A368 324 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3FA6NER0 549 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3LB9A6J9 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 MMP20O60882 483 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 SEMA4FO95754 770 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 C1SP09871 688 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3HP0C7X1 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 MYBL2P10244 700 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 LPOP22079 712 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 PDE1BQ01064 536 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 LAMB3Q13751 1172 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 SEPT6Q14141 434 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 ANGPT1Q15389 498 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3GQ6DHY5 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3CQ6IPX1 549 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 LONP2Q86WA8 852 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 TBC1D3Q8IZP1 549 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 PPHLN1Q8NEY8 458 aaKnown RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 WDR83Q9BRX9 315 aaKnown RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 PARD6BQ9BYG5 372 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 MRM3Q9HC36 420 aaKnown RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 CHRAC1Q9NRG0 131 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 IL17CQ9P0M4 197 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 SOX13Q9UN79 622 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 ZFR2Q9UPR6 939 aaKnown RBP24.25■■□□□ 1.47
HMGA2-201ENST00000354636 KCTD3Q9Y597 815 aa24.25■■□□□ 1.47
HMGA2-201ENST00000354636 LRRC72A6NJI9 287 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 BUD23O43709 281 aaKnown RBP24.24■■□□□ 1.47
HMGA2-201ENST00000354636 SLC4A1P02730 911 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 C6P13671 934 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 GM2AP17900 193 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 KIAA1161Q6NSJ0 714 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 CASC4Q6P4E1 433 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 HSD11B1LQ7Z5J1 315 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 RAVER1Q8IY67 606 aaKnown RBP24.24■■□□□ 1.47
HMGA2-201ENST00000354636 MYRIPQ8NFW9 859 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 NELL1Q92832 810 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 ZNF778Q96MU6 729 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 EBNA1BP2Q99848 306 aaKnown RBP24.24■■□□□ 1.47
HMGA2-201ENST00000354636 C19orf43Q9BQ61 176 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 FAM126AQ9BYI3 521 aaPredicted RBP24.24■■□□□ 1.47
HMGA2-201ENST00000354636 TSPYL1Q9H0U9 437 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 MAD1L1Q9Y6D9 718 aa24.24■■□□□ 1.47
HMGA2-201ENST00000354636 BPTFQ12830 3046 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 LRRK1Q38SD2 2015 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 DLL1O00548 723 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 CTIFO43310 598 aaKnown RBP24.23■■□□□ 1.47
HMGA2-201ENST00000354636 RNGTTO60942 597 aaKnown RBP24.23■■□□□ 1.47
HMGA2-201ENST00000354636 ELK3P41970 407 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 ZNF140P52738 457 aaPredicted RBP24.23■■□□□ 1.47
HMGA2-201ENST00000354636 RPS21P63220 83 aaKnown RBP24.23■■□□□ 1.47
HMGA2-201ENST00000354636 CREB5Q02930 508 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 FASTKD3Q14CZ7 662 aaKnown RBP24.23■■□□□ 1.47
HMGA2-201ENST00000354636 ELF2Q15723 593 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 TMEM259Q4ZIN3 620 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 CCDC25Q86WR0 208 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 IGDCC3Q8IVU1 814 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 STYXQ8WUJ0 223 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.23■■□□□ 1.471e-7■■□□□ 11.4
HMGA2-201ENST00000354636 PEX13Q92968 403 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 COQ10AQ96MF6 247 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 SAYSD1Q9NPB0 183 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 SAMD15Q9P1V8 674 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 MBD1Q9UIS9 605 aaPredicted RBP24.23■■□□□ 1.47
HMGA2-201ENST00000354636 RAB21Q9UL25 225 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 RIMKLBQ9ULI2 386 aa24.23■■□□□ 1.47
HMGA2-201ENST00000354636 A0A1W2PQU0 124 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 IGLON5A6NGN9 336 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 MAP3K13O43283 966 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 NDUFS2O75306 463 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 TUBBP07437 444 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 MCM3P25205 808 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 PSMA3P25788 255 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 SPINT3P49223 89 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 NUBP1P53384 320 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 PTPRCAPQ14761 206 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 ZNF528Q3MIS6 628 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 HP1BP3Q5SSJ5 553 aaPredicted RBP24.22■■□□□ 1.47
HMGA2-201ENST00000354636 TSTD2Q5T7W7 516 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 SEL1L3Q68CR1 1132 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 NLRP9Q7RTR0 991 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 TECPR1Q7Z6L1 1165 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 TMEM135Q86UB9 458 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 TRIM69Q86WT6 500 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 HORMAD1Q86X24 394 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 GSPT2Q8IYD1 628 aaKnown RBP24.22■■□□□ 1.47
HMGA2-201ENST00000354636 ZBED8Q8IZ13 594 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 STAMBPL1Q96FJ0 436 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 NAT9Q9BTE0 207 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 LRFN3Q9BTN0 628 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 GPR174Q9BXC1 333 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 PKP3Q9Y446 797 aa24.22■■□□□ 1.47
HMGA2-201ENST00000354636 CUL9Q8IWT3 2517 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms