RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 CHURC1-FNTBB4DL54 471 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 STK25O00506 426 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 RPP40O75818 363 aaKnown RBP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 PIAS1O75925 651 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 VAPBO95292 243 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ERVK-10P10266 1014 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 LHCGRP22888 699 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ARNTP27540 789 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 DRD3P35462 400 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 P2RY2P41231 377 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ARCN1P48444 511 aaKnown RBP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ARSDP51689 593 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 MGAT5Q09328 741 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 CNTN1Q12860 1018 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ARHGEF7Q14155 803 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 KLHL38Q2WGJ6 581 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 PDPK2PQ6A1A2 396 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 DPPA4Q7L190 304 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 KCNMB4Q86W47 210 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 HDAC10Q969S8 669 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ZBTB9Q96C00 473 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 CDKN2AIPNLQ96HQ2 116 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 NECAB3Q96P71 396 aaPredicted RBP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 RUFY1Q96T51 708 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 BPIFA1Q9NP55 256 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 SMYD2Q9NRG4 433 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 POLR3BQ9NW08 1133 aaPredicted RBP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 CCL22O00626 93 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ZNF30P17039 623 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 HADHAP40939 763 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 PRAMEP78395 509 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ZXDAP98168 799 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 PTSQ03393 145 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ELP6Q0PNE2 266 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 EFTUD2Q15029 972 aaKnown RBP eCLIP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 HDDC3Q8N4P3 179 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 AADATQ8N5Z0 425 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 CDKL2Q92772 493 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 RAB7BQ96AH8 199 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 PBXIP1Q96AQ6 731 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 C19orf43Q9BQ61 176 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ROPN1BQ9BZX4 212 aaPredicted RBP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 SLC6A17Q9H1V8 727 aa20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 ROPN1Q9HAT0 212 aaPredicted RBP20.12■□□□□ 0.81
SIGMAR1-202ENST00000353468 CXorf49A8MYA2 514 aaPredicted RBP20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 POC1B-GALNT4F8VUJ3 575 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 AREL1O15033 823 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 SLC7A4O43246 635 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 ATG13O75143 517 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 TCEA3O75764 348 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 DNTTP04053 509 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 C7P10643 843 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 MMP12P39900 470 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 ZNF844Q08AG5 666 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 CCDC15Q0P6D6 951 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 RALGDSQ12967 914 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 GAS6Q14393 721 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 SMAD1Q15797 465 aaKnown RBP20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 HSP90AA5PQ58FG0 334 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 CEP85LQ5SZL2 805 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 TRIM67Q6ZTA4 783 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 SYT13Q7L8C5 426 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 CTAGE3PQ8IX95 158 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 OR6P1Q8NGX9 317 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 SIPA1Q96FS4 1042 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 TMEM109Q9BVC6 243 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 OSBPL6Q9BZF3 934 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 ACBD3Q9H3P7 528 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 SUDS3Q9H7L9 328 aaPredicted RBP20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 VPS18Q9P253 973 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 SCML1Q9UN30 329 aa20.11■□□□□ 0.81
SIGMAR1-202ENST00000353468 A0A1W2PP55 124 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 GOLGA8KD6RF30 607 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 GOLGA8TH3BQL2 631 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 AGPSO00116 658 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 SPINT1O43278 529 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 IVLP07476 585 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 ZBTB16Q05516 673 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 THOC5Q13769 683 aaKnown RBP20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 PIP5KL1Q5T9C9 394 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 TEDDM1Q5T9Z0 273 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 RASSF3Q86WH2 238 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 PPM1NQ8N819 430 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 FLCNQ8NFG4 579 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 MRGPRX1Q96LB2 322 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 OMDQ99983 421 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 POLMQ9NP87 494 aaPredicted RBP20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 IARS2Q9NSE4 1012 aaKnown RBP20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 ZFATQ9P243 1243 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 FETUBQ9UGM5 382 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 FKBPLQ9UIM3 349 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 ITM2BQ9Y287 266 aa20.1■□□□□ 0.81
SIGMAR1-202ENST00000353468 TCRBV21S2A2A0A5A6 115 aa20.09■□□□□ 0.81
SIGMAR1-202ENST00000353468 CCDC162PA2VCL2 907 aa20.09■□□□□ 0.81
SIGMAR1-202ENST00000353468 H7C0S8 307 aa20.09■□□□□ 0.81
SIGMAR1-202ENST00000353468 RASGRF2O14827 1237 aa20.09■□□□□ 0.81
SIGMAR1-202ENST00000353468 GOT2P00505 430 aaKnown RBP20.09■□□□□ 0.81
SIGMAR1-202ENST00000353468 C1SP09871 688 aa20.09■□□□□ 0.81
SIGMAR1-202ENST00000353468 STC1P52823 247 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms