RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 RPL26L1Q9UNX3 145 aaKnown RBP16.02■□□□□ 0.16
PTPN11-201ENST00000351677 NCKAP1Q9Y2A7 1128 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.02■□□□□ 0.16
PTPN11-201ENST00000351677 MT-CYBP00156 380 aaPredicted RBP16.02■□□□□ 0.16
PTPN11-201ENST00000351677 NMBRP28336 390 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 NAA20P61599 178 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 ITGADQ13349 1161 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 FAM110CQ1W6H9 321 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 BROXQ5VW32 411 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 ZBTB46Q86UZ6 589 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 NAT16Q8N8M0 369 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 C19orf60Q96EN9 201 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 MYO19Q96H55 970 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 C7orf26Q96N11 449 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 NDUFB5O43674 189 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 GABRR2P28476 465 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 EPS8Q12929 822 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 CA9Q16790 459 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 SPANXN2Q5MJ10 180 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 SERPINA13PQ6UXR4 307 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 KBTBD2Q8IY47 623 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 PARP8Q8N3A8 854 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 AADATQ8N5Z0 425 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 CD101Q93033 1021 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 EPB41L4BQ9H329 900 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 NR2E3Q9Y5X4 410 aa16.02■□□□□ 0.16
PTPN11-201ENST00000351677 RFXANKO14593 260 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 UMPSP11172 480 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 LILRA4P59901 499 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 PPP1R15BQ5SWA1 713 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 EIF3MQ7L2H7 374 aaKnown RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 ARHGAP22Q7Z5H3 698 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 DSELQ8IZU8 1212 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 S100A14Q9HCY8 104 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 C3orf18Q9UK00 162 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 MRPS23Q9Y3D9 190 aaKnown RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 TIMM22Q9Y584 194 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 EFCAB10A6NFE3 127 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 ARL13AQ5H913 290 aaPredicted RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 ZNF57Q68EA5 555 aaPredicted RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 CLEC6AQ6EIG7 209 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 CIR1Q86X95 450 aaPredicted RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 PQLC1Q8N2U9 271 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 PCDH19Q8TAB3 1148 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 CENPIQ92674 756 aaPredicted RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 MAML3Q96JK9 1138 aa16.02■□□□□ 0.15
PTPN11-201ENST00000351677 NOL11Q9H8H0 719 aaKnown RBP16.02■□□□□ 0.15
PTPN11-201ENST00000351677 SLC9A3R1O14745 358 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 TGDSO95455 350 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 IFNGR2P38484 337 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 EIF2B2P49770 351 aaKnown RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 COX10Q12887 443 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 FAM182AQ5T1J6 154 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 DCAF12L1Q5VU92 463 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 ZDHHC24Q6UX98 284 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 TAC4Q86UU9 113 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CSGALNACT1Q8TDX6 532 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 HMGXB4Q9UGU5 601 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 LYVE1Q9Y5Y7 322 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 RPL5P46777 297 aaKnown RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 NR1H2P55055 460 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 USP46P62068 366 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 TMEM192Q8IY95 271 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 TBATAQ96M53 351 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 NOL6Q9H6R4 1146 aaKnown RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CDH22Q9UJ99 828 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 ZNF180Q9UJW8 692 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 NUDT14O95848 222 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CORO1AP31146 461 aaKnown RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CTNNB1P35222 781 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 GUCA1AP43080 201 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 LIMK2P53671 638 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 TOP3AQ13472 1001 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 GSTA3Q16772 222 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 LINGO4Q6UY18 593 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 ZNF540Q8NDQ6 660 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 ANKRD49Q8WVL7 239 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 OSBPL11Q9BXB4 747 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 IKZF3Q9UKT9 509 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 KCNU1A8MYU2 1149 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 ZNF460Q14592 562 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 MACC1Q6ZN28 852 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 DCBLD1Q8N8Z6 715 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 UBE2E3Q969T4 207 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 VPS35Q96QK1 796 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 NTPCRQ9BSD7 190 aaKnown RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 SPRTNQ9H040 489 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 DNAJC28Q9NX36 388 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 SNAP91O60641 907 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 SLC25A14O95258 325 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-201ENST00000351677 C1RP00736 705 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CYP4F2P78329 520 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 CYP4F3Q08477 520 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
PTPN11-201ENST00000351677 PARP15Q460N3 678 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms