RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CHKBQ9Y259 395 aa12.18□□□□□ -0.46
SMAD9-201ENST00000350148 C15orf41Q9Y2V0 281 aa12.18□□□□□ -0.46
SMAD9-201ENST00000350148 SPACA6W5XKT8 324 aa12.18□□□□□ -0.46
SMAD9-201ENST00000350148 FAM159BA6NKW6 160 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 DGKIO75912 1065 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 HNRNPA1P09651 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 LBPP18428 481 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 RPL17P18621 184 aaKnown RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 EIF2B2P49770 351 aaKnown RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 HORMAD1Q86X24 394 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 OR7D4Q8NG98 312 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 DNAJC9Q8WXX5 260 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 ALG9Q9H6U8 611 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 PCP4L1A6NKN8 68 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 HNRNPRO43390 633 aaKnown RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 PAPSS2O95340 614 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 GRIA4P48058 902 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 FRG1Q14331 258 aaKnown RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CYS1Q717R9 158 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 TTC7BQ86TV6 843 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 PTGR2Q8N8N7 351 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 SESN1Q9Y6P5 492 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 C5orf58C9J3I9 102 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 KDELR3O43731 214 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 SERPINA6P08185 405 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 HALP42357 657 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CAP1Q01518 475 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 UBE3AQ05086 875 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 ACAP2Q15057 778 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 RHBDF2Q6PJF5 856 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 UMODL1-AS1Q8N2C9 162 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 METTL6Q8TCB7 284 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 RTP4Q96DX8 246 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CDH19Q9H159 772 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CCDC134Q9H6E4 229 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CHRAC1Q9NRG0 131 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 EME2A4GXA9 379 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 E9PBE3 544 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 KLHL41O60662 606 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 FCGR1AP12314 374 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CXCR2P25025 360 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 VHLP40337 213 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CTBP1Q13363 440 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 PEX6Q13608 980 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 FASTKD3Q14CZ7 662 aaKnown RBP12.17□□□□□ -0.46
SMAD9-201ENST00000350148 NR6A1Q15406 480 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 MS4A13Q5J8X5 152 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 ZYG11AQ6WRX3 759 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 C17orf80Q9BSJ5 609 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 CCDC28BQ9BUN5 200 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 KATNBL1Q9H079 304 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 MYLK2Q9H1R3 596 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 DZANK1Q9NVP4 752 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 TEX264Q9Y6I9 313 aa12.17□□□□□ -0.46
SMAD9-201ENST00000350148 GLYATL1P3A0A0U1RQE8 302 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 CCDC189A1A4V9 331 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 FGF18O76093 207 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 PLOD1Q02809 727 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 DSC3Q14574 896 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 LRRC36Q1X8D7 754 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SPDYE7PQ495Y7 208 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SGO1Q5FBB7 561 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 RNF19BQ6ZMZ0 732 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 TIFABQ6ZNK6 161 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 BANPQ8N9N5 519 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SERAC1Q96JX3 654 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 HEPHQ9BQS7 1158 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 DUS2Q9NX74 493 aaKnown RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SNX6Q9UNH7 406 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SLC28A1O00337 649 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 OTCP00480 354 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 ESR1P03372 595 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 PTGER3P43115 390 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 NAGLUP54802 743 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 KRT72Q14CN4 511 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 METTL21CQ5VZV1 264 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 AZIN2Q96A70 460 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 PPP3R2Q96LZ3 170 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 QRFPRQ96P65 431 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 ECSITQ9BQ95 431 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 MFSD1Q9H3U5 465 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 TLR9Q9NR96 1032 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SNX10Q9Y5X0 201 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 NBNO60934 754 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SPATA31D3P0C874 917 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 ACRP10323 421 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 GPM6BQ13491 265 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 CYP2A13Q16696 494 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 TMEM259Q4ZIN3 620 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SPATA31D4Q6ZUB0 917 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 CLYBLQ8N0X4 340 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 OR4K2Q8NGD2 314 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 TMEM237Q96Q45 408 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 COPG2Q9UBF2 871 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 NDUFAF1Q9Y375 327 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 E7ESA3 106 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms