RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 TMEM199Q8N511 208 aa6□□□□□ -1.45
RFC1-201ENST00000349703 COMMD1Q8N668 190 aa6□□□□□ -1.45
RFC1-201ENST00000349703 ANKRD52Q8NB46 1076 aa6□□□□□ -1.45
RFC1-201ENST00000349703 PELOQ9BRX2 385 aaKnown RBP6□□□□□ -1.45
RFC1-201ENST00000349703 MRPL46Q9H2W6 279 aaKnown RBP6□□□□□ -1.45
RFC1-201ENST00000349703 ARHGEF4Q9NR80 690 aa6□□□□□ -1.45
RFC1-201ENST00000349703 NKX1-2Q9UD57 310 aaPredicted RBP6□□□□□ -1.45
RFC1-201ENST00000349703 CIDEBQ9UHD4 219 aa6□□□□□ -1.45
RFC1-201ENST00000349703 TRBC2A0A5B9 178 aa6□□□□□ -1.45
RFC1-201ENST00000349703 UBXN8O00124 270 aa6□□□□□ -1.45
RFC1-201ENST00000349703 MDM4O15151 490 aa6□□□□□ -1.45
RFC1-201ENST00000349703 MTRF1O75570 445 aaKnown RBP6□□□□□ -1.45
RFC1-201ENST00000349703 FAM200BP0CF97 657 aa6□□□□□ -1.45
RFC1-201ENST00000349703 IL1R2P27930 398 aa6□□□□□ -1.45
RFC1-201ENST00000349703 PTPN4P29074 926 aa6□□□□□ -1.45
RFC1-201ENST00000349703 GNPDA1P46926 289 aa6□□□□□ -1.45
RFC1-201ENST00000349703 KLK7P49862 253 aa6□□□□□ -1.45
RFC1-201ENST00000349703 LILRA4P59901 499 aa6□□□□□ -1.45
RFC1-201ENST00000349703 KCNJ10P78508 379 aa6□□□□□ -1.45
RFC1-201ENST00000349703 FOXO4P98177 505 aa6□□□□□ -1.45
RFC1-201ENST00000349703 DSG1Q02413 1049 aa6□□□□□ -1.45
RFC1-201ENST00000349703 OVGP1Q12889 678 aa6□□□□□ -1.45
RFC1-201ENST00000349703 TAF13Q15543 124 aa6□□□□□ -1.45
RFC1-201ENST00000349703 LGSNQ5TDP6 509 aa6□□□□□ -1.45
RFC1-201ENST00000349703 CIR1Q86X95 450 aaPredicted RBP6□□□□□ -1.45
RFC1-201ENST00000349703 ZSWIM9Q86XI8 627 aa6□□□□□ -1.45
RFC1-201ENST00000349703 PHC2Q8IXK0 858 aa6□□□□□ -1.45
RFC1-201ENST00000349703 CADM4Q8NFZ8 388 aa6□□□□□ -1.45
RFC1-201ENST00000349703 OR14A2Q96R54 314 aa6□□□□□ -1.45
RFC1-201ENST00000349703 LGMNQ99538 433 aa6□□□□□ -1.45
RFC1-201ENST00000349703 TCF25Q9BQ70 676 aa6□□□□□ -1.45
RFC1-201ENST00000349703 H2AFJQ9BTM1 129 aa6□□□□□ -1.45
RFC1-201ENST00000349703 MTMR12Q9C0I1 747 aa6□□□□□ -1.45
RFC1-201ENST00000349703 MRPL18Q9H0U6 180 aaKnown RBP6□□□□□ -1.45
RFC1-201ENST00000349703 LMAN2LQ9H0V9 348 aa6□□□□□ -1.45
RFC1-201ENST00000349703 C11orf54Q9H0W9 315 aaPredicted RBP6□□□□□ -1.45
RFC1-201ENST00000349703 MGAT4CQ9UBM8 478 aa6□□□□□ -1.45
RFC1-201ENST00000349703 ST3GAL5Q9UNP4 418 aa6□□□□□ -1.45
RFC1-201ENST00000349703 LMTK3Q96Q04 1460 aa6□□□□□ -1.45
RFC1-201ENST00000349703 SPEF2Q9C093 1822 aa6□□□□□ -1.45
RFC1-201ENST00000349703 PGPEP1LA6NFU8 196 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 NCAM2O15394 837 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CST3P01034 146 aaPredicted RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 NR3C2P08235 984 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 PLEKP08567 350 aaPredicted RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 CD63P08962 238 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ADCY7P51828 1080 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 PRKAA1Q13131 559 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CA9Q16790 459 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 Q6ZNB5 142 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 PIGWQ7Z7B1 504 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 NELFCDQ8IXH7 590 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CMIPQ8IY22 773 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 GPR156Q8NFN8 814 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 RNF141Q8WVD5 230 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 SNF8Q96H20 258 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 MRGPRX4Q96LA9 322 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 FANCD2OSQ96PS1 177 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 HS3ST6Q96QI5 342 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CNPY3Q9BT09 278 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 DCUN1D5Q9BTE7 237 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CARS2Q9HA77 564 aaKnown RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 PIH1D3Q9NQM4 214 aaKnown RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 TJP2Q9UDY2 1190 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 STEAP1Q9UHE8 339 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CCPG1Q9ULG6 757 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ZNF148Q9UQR1 794 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 MST1RQ04912 1400 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 A0A0J9YVX5 310 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 EXOC1LA0A1B0GW35 172 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ATP9AO75110 1047 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 OR6A2O95222 327 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ACSL3O95573 720 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ECDO95905 644 aaPredicted RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 CCDC159P0C7I6 412 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 HGFP14210 728 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 CTBSQ01459 385 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 DMPKQ09013 629 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 HSPB3Q12988 150 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 PUM1Q14671 1186 aaKnown RBP eCLIP5.99□□□□□ -1.456e-7■■■□□ 16.1
RFC1-201ENST00000349703 FSCN1Q16658 493 aaKnown RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 DNAL1Q4LDG9 190 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 PLAC9Q5JTB6 97 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ASTLQ6HA08 431 aaPredicted RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 ANO7Q6IWH7 933 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ZNF655Q8N720 491 aaPredicted RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 TLCD1Q96CP7 247 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 ZFP42Q96MM3 310 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 RBM14Q96PK6 669 aaKnown RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 TRIM51Q9BSJ1 452 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 FAM126AQ9BYI3 521 aaPredicted RBP5.99□□□□□ -1.45
RFC1-201ENST00000349703 WNT8AQ9H1J5 351 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 BRF2Q9HAW0 419 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 SAR1AQ9NR31 198 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 DUSP12Q9UNI6 340 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 HS3ST4Q9Y661 456 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 NID2Q14112 1375 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 A0A0G2JLW4 131 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 LINC00854A0A1B0GVQ3 168 aa5.99□□□□□ -1.45
RFC1-201ENST00000349703 EIF4E1BA6NMX2 242 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms