RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 FBXO47Q5MNV8 452 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SYPL2Q5VXT5 272 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SLC27A1Q6PCB7 646 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 ZNF773Q6PK81 442 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 PTCD2Q8WV60 388 aaKnown RBP18.69■□□□□ 0.58
SCARF1-202ENST00000348987 NXNL1Q96CM4 212 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 DHRS1Q96LJ7 313 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 BFARQ9NZS9 450 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 FZD10Q9ULW2 581 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 RAD54BQ9Y620 910 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 PDHXO00330 501 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 TOR1BO14657 336 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-202ENST00000348987 YBX1P67809 324 aaKnown RBP18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SELENBP1Q13228 472 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 AQP6Q13520 282 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 INAVAQ3KP66 663 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 TMTC4Q5T4D3 741 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 RETREG3Q86VR2 466 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 UNC93AQ86WB7 457 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SLC41A1Q8IVJ1 513 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 BEST2Q8NFU1 509 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SGCDQ92629 289 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
SCARF1-202ENST00000348987 ZUFSPQ96AP4 578 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 APOL2Q9BQE5 337 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SYT17Q9BSW7 474 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 VTA1Q9NP79 307 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 PCDH12Q9NPG4 1184 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-202ENST00000348987 ERVK-11Q9UQG0 969 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 ANKRD6Q9Y2G4 727 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 PLXNA1Q9UIW2 1896 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FAM72CH0Y354 149 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 YWHAQP27348 245 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 SOX11P35716 441 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 MATKP42679 507 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 RPS9P46781 194 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 OCA2Q04671 838 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 INAQ16352 499 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 PRAMEF19Q5SWL8 479 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FAM72AQ5TYM5 149 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 AGAP7PQ5VUJ5 663 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 GTF2IRD2BQ6EKJ0 949 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FAM72DQ6L9T8 149 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 HFE2Q6ZVN8 426 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 GTF2IRD2Q86UP8 949 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FAM35AQ86V20 835 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FAM72BQ86X60 149 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 SPNS2Q8IVW8 549 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 LRRC52Q8N7C0 313 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 NAT16Q8N8M0 369 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 RNF139Q8WU17 664 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 TMEM40Q8WWA1 233 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 SLC45A3Q96JT2 553 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 MCMBPQ9BTE3 642 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FAM124BQ9H5Z6 455 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 PLEKHA5Q9HAU0 1116 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 CACNG4Q9UBN1 327 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 WARS2Q9UGM6 360 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 ZNF638Q14966 1978 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 ATP6AP2A0A1C7CYW4 349 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 HACD1B0YJ81 288 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 ATP6AP2O75787 350 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 MT-ND1P03886 318 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 SMPD1P17405 629 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 TPH1P17752 444 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 PLA2G16P53816 162 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 SLC12A1Q13621 1099 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 ALKAL1Q6UXT8 129 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 CTU1Q7Z7A3 348 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 TXNDC5Q8NBS9 432 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 PNPT1Q8TCS8 783 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 MUS81Q96NY9 551 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 GPR22Q99680 433 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 TRIM8Q9BZR9 551 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 POMKQ9H5K3 350 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 FBRSL1Q9HCM7 1045 aaKnown RBP18.68■□□□□ 0.58
SCARF1-202ENST00000348987 HMG20AQ9NP66 347 aa18.68■□□□□ 0.58
SCARF1-202ENST00000348987 SMIM28A0A1B0GU29 152 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 AQP12BA6NM10 295 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 I6L893 689 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-202ENST00000348987 GMNNO75496 209 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 CSRP3P50461 194 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 DMPKQ09013 629 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 DCAF4L1Q3SXM0 396 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 ZIK1Q3SY52 487 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-202ENST00000348987 TIGD2Q4W5G0 525 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 USP51Q70EK9 711 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 ZC3HC1Q86WB0 502 aaKnown RBP18.67■□□□□ 0.58
SCARF1-202ENST00000348987 AQP12AQ8IXF9 295 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 RAVER1Q8IY67 606 aaKnown RBP18.67■□□□□ 0.58
SCARF1-202ENST00000348987 ADGRG5Q8IZF4 528 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 GPRC5AQ8NFJ5 357 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 BCAS1O75363 584 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-202ENST00000348987 GPR32O75388 356 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 TGM1P22735 817 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 GJA9P57773 515 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms