RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 DENND4AQ7Z401 1863 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 ERICH4A6NGS2 130 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 H7C0S8 307 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 SAT1P21673 171 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 HMGCLP35914 325 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 SLC6A11P48066 632 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 SLC12A2P55011 1212 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 RAB10P61026 200 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ST8SIA6P61647 398 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 PTPRRQ15256 657 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TYSND1Q2T9J0 566 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ZNF789Q5FWF6 425 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 LYSMD3Q7Z3D4 306 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 CLEC14AQ86T13 490 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TRIM42Q8IWZ5 723 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ST13P5Q8NFI4 369 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 MYLIPQ8WY64 445 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 HEPHQ9BQS7 1158 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 PRO3102Q9H379 93 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 FGFR1OP2Q9NVK5 253 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 INTS10Q9NVR2 710 aaKnown RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ELOVL2Q9NXB9 296 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 CLDND1Q9NY35 253 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 IL17CQ9P0M4 197 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 PPIL1Q9Y3C6 166 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 OTOL1A6NHN0 477 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TTC34A8MYJ7 566 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TOP3BO95985 862 aaKnown RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 NEFHP12036 1026 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 COL6A2P12110 1019 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 LAMP2P13473 410 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 PSMC3P17980 439 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 PMLP29590 882 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 HNF1BP35680 557 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 DLX2Q07687 328 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 RUNX3Q13761 415 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ZKSCAN8Q15776 578 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 DBN1Q16643 649 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 PTPRNQ16849 979 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 CCDC153Q494R4 210 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 GKAP1Q5VSY0 366 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 GDPD4Q6W3E5 623 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 LDB1Q86U70 411 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ZSWIM9Q86XI8 627 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 CCDC63Q8NA47 563 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 CHST14Q8NCH0 376 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TSPAN17Q96FV3 270 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TSNARE1Q96NA8 513 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 LYSMD1Q96S90 227 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 TCF12Q99081 682 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 MANSC1Q9H8J5 431 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 ZFYVE1Q9HBF4 777 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 FKBPLQ9UIM3 349 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 EMCNQ9ULC0 261 aa21.47■■□□□ 1.03
TSPAN3-202ENST00000346495 BIRC5O15392 142 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 PLIN3O60664 434 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 UGT2B4P06133 528 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 MC4RP32245 332 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 STC1P52823 247 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 EIF4HQ15056 248 aaKnown RBP21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 C16orf46Q6P387 395 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 USP45Q70EL2 814 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 OMDQ99983 421 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 PLA2G2FQ9BZM2 168 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 BPIFA1Q9NP55 256 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 TMEM216Q9P0N5 145 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 PLA2G4CQ9UP65 541 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 ACOT9Q9Y305 439 aa21.46■■□□□ 1.03
TSPAN3-202ENST00000346495 COL4A3Q01955 1670 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 A0A087X1B8 175 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 C1orf232A0A0U1RR37 186 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 PFDN6O15212 129 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 PHGDHO43175 533 aaKnown RBP21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 PROCP04070 461 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 TAS2R39P59534 338 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 POLR2LP62875 67 aaKnown RBP21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 GRM2Q14416 872 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 SEMA3AQ14563 771 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 CDKN3Q16667 212 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 RBM20Q5T481 1227 aaKnown RBP21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 FAM45BPQ6NSW5 357 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 PLD6Q8N2A8 252 aaKnown RBP21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 KDM1BQ8NB78 822 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 FAM45AQ8TCE6 357 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 GRAMD1AQ96CP6 724 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 SCRN2Q96FV2 425 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 KXD1Q9BQD3 176 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 PITPNM3Q9BZ71 974 aa21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.45■■□□□ 1.02
TSPAN3-202ENST00000346495 BPGMP07738 259 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 SLC35E2BP0CK96 405 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 IRF9Q00978 393 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 KDSRQ06136 332 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 HECTD2Q5U5R9 776 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 TPRG1Q6ZUI0 275 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 PIGWQ7Z7B1 504 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 NUDCD3Q8IVD9 361 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 CEP97Q8IW35 865 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms