RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SGSHP51688 502 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 INHBCP55103 352 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 GNA12Q03113 381 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 GALNT1Q10472 559 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 FLOT2Q14254 428 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 RFTN1Q14699 578 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 OR4D1Q15615 310 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SDCCAG8Q86SQ7 713 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SLC22A9Q8IVM8 553 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 RYBPQ8N488 228 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 EXT2Q93063 718 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PPP2R3CQ969Q6 453 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 L3HYPDHQ96EM0 354 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ELAC1Q9H777 363 aaKnown RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PSMD13Q9UNM6 376 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ACOT8O14734 319 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ACSL4O60488 711 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SERPINF2P08697 491 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 MTHFD2P13995 350 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ZNF37AP17032 561 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 RPL17P18621 184 aaKnown RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SH3BP2P78314 561 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PTK2BQ14289 1009 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 UGT3A2Q3SY77 523 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SETMARQ53H47 684 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 FOXB2Q5VYV0 432 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 IL31Q6EBC2 164 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 CRIPAKQ8N1N5 446 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PQLC1Q8N2U9 271 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PCDH20Q8N6Y1 951 aaKnown RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 OR4L1Q8NH43 312 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 CD99L2Q8TCZ2 262 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 CDKN2AIPNLQ96HQ2 116 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PRICKLE1Q96MT3 831 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 MGME1Q9BQP7 344 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ZBED2Q9BTP6 218 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 YIPF3Q9GZM5 350 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 FBRSL1Q9HCM7 1045 aaKnown RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 TRPC7Q9HCX4 862 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 MED16Q9Y2X0 877 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 PCDHGA7Q9Y5G6 932 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 LAMA3Q16787 3333 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ARVCFO00192 962 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 UBDO15205 165 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 KLKB1P03952 638 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 TCN1P20061 433 aaPredicted RBP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 SUOXP51687 545 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 BTG3Q14201 252 aaPredicted RBP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 OGFRL1Q5TC84 451 aaPredicted RBP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 BHLHE22Q8NFJ8 381 aaPredicted RBP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 OR9I1Q8NGQ6 314 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 FAR2Q96K12 515 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 TTLL2Q9BWV7 592 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 VCXQ9H320 206 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 CATSPERZQ9NTU4 200 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 CCDC167Q9P0B6 97 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 UBXN8O00124 270 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 NDST3O95803 873 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 PRLP01236 227 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 ME2P23368 584 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 STC1P52823 247 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 HERVK_113P63132 956 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 NFKB2Q00653 900 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 AGKQ53H12 422 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 MRNIPQ6NTE8 343 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 LARP4Q71RC2 724 aaKnown RBP eCLIP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 DENND1CQ8IV53 801 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 LILRA2Q8N149 483 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 MDGA1Q8NFP4 955 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 PEX13Q92968 403 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 KLHL32Q96NJ5 620 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 ZNF599Q96NL3 588 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 NSUN5Q96P11 429 aaKnown RBP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 TSEN34Q9BSV6 310 aaKnown RBP15.44■□□□□ 0.06
UPF3B-202ENST00000345865 SPON2Q9BUD6 331 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 ERVK-6Q9BXR3 956 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 IKZF3Q9UKT9 509 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 PTGDR2Q9Y5Y4 395 aa15.44■□□□□ 0.06
UPF3B-202ENST00000345865 KIF1CO43896 1103 aaKnown RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ATP5C1P36542 298 aaKnown RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ALDH1A3P47895 512 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 SCNN1BP51168 640 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ZNF140P52738 457 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 FOXA1P55317 472 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 LRP8Q14114 963 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 FASTKQ14296 549 aaKnown RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 PTPRRQ15256 657 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 PTGR2Q8N8N7 351 aaPredicted RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 FBXO22Q8NEZ5 403 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 AARSD1Q9BTE6 412 aaKnown RBP15.43■□□□□ 0.06
UPF3B-202ENST00000345865 TTPALQ9BTX7 342 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 MAGEH1Q9H213 219 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 GKN1Q9NS71 199 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 DNMT3LQ9UJW3 386 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ASB3Q9Y575 518 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 ANKRD36A6QL64 1941 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 SCN5AQ14524 2016 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 GBF1Q92538 1859 aa15.43■□□□□ 0.06
UPF3B-202ENST00000345865 A0A1B0GTL3 188 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms