RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 ADAMTS10Q9H324 1103 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 ZNF232Q9UNY5 417 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 PPP2R3BQ9Y5P8 575 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 C1orf232A0A0U1RR37 186 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 AQP12BA6NM10 295 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 ARPC2O15144 300 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 KCNH1O95259 989 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 RASAL1O95294 804 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 POU4F1Q01851 419 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 ITGADQ13349 1161 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 AGAP9Q5VTM2 703 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 CLEC20AQ6ZU45 233 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 AQP12AQ8IXF9 295 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 MYRFLQ96LU7 910 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 VAT1Q99536 393 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 ALG9Q9H6U8 611 aa17.82■□□□□ 0.44
VHL-202ENST00000345392 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.82■□□□□ 0.44
VHL-202ENST00000345392 ELK4P28324 431 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 CAPGP40121 348 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 KPNA2P52292 529 aaKnown RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 SOX4Q06945 474 aaPredicted RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 MOGQ16653 247 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 GEN1Q17RS7 908 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 UGT3A2Q3SY77 523 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 LDB1Q86U70 411 aaPredicted RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 TKTL2Q9H0I9 626 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 MRGBPQ9NV56 204 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 TCAF1Q9Y4C2 921 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 FXYD1O00168 92 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 ANGPT2O15123 496 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 LTA4HP09960 611 aaKnown RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 BDNFP23560 247 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 SLC6A2P23975 617 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 ACADVLP49748 655 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 GRB7Q14451 532 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 CYP2A13Q16696 494 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 ZIK1Q3SY52 487 aaPredicted RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 C1QTNF12Q5T7M4 302 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 EGFLAMQ63HQ2 1017 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 NEPROQ6NW34 567 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 GALNT18Q6P9A2 607 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 BPIFB6Q8NFQ5 453 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 DNAJB14Q8TBM8 379 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 DQX1Q8TE96 717 aaKnown RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 SH3RF2Q8TEC5 729 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 DPF3Q92784 378 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 PPP1R10Q96QC0 940 aaKnown RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 SEZ6LQ9BYH1 1024 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 SMPD3Q9NY59 655 aaPredicted RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 IFT80Q9P2H3 777 aaPredicted RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 ABCD2Q9UBJ2 740 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 RAD54BQ9Y620 910 aa17.81■□□□□ 0.44
VHL-202ENST00000345392 ZFC3H1O60293 1989 aaKnown RBP17.81■□□□□ 0.44
VHL-202ENST00000345392 PIRO00625 290 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 USP17L7P0C7H9 530 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 CES1P23141 567 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 TTKP33981 857 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 HALP42357 657 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 LDLRAP1Q5SW96 308 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 TMTC4Q5T4D3 741 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 IRAK1BP1Q5VVH5 260 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 TBPL2Q6SJ96 375 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 GPRIN1Q7Z2K8 1008 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 SPRED1Q7Z699 444 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 TRPV3Q8NET8 790 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 FEM1CQ96JP0 617 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 TNIP3Q96KP6 325 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 HNRNPABQ99729 332 aaKnown RBP17.8■□□□□ 0.44
VHL-202ENST00000345392 TRIM15Q9C019 465 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 PIF1Q9H611 641 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 FANCEQ9HB96 536 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 ACTR3BQ9P1U1 418 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 GFAPP14136 432 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 CCNA2P20248 432 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 RPS9P46781 194 aaKnown RBP17.8■□□□□ 0.44
VHL-202ENST00000345392 POLD2P49005 469 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 MLLT10P55197 1068 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 SH3BP2P78314 561 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 FUT11Q495W5 492 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 RABL3Q5HYI8 236 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 SLC35B4Q969S0 331 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 NTAN1Q96AB6 310 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 CCDC126Q96EE4 140 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 SEPHS2Q99611 448 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 HOPXQ9BPY8 73 aaPredicted RBP17.8■□□□□ 0.44
VHL-202ENST00000345392 COLEC11Q9BWP8 271 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 BRD8Q9H0E9 1235 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 WDCPQ9H6R7 721 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 WDR37Q9Y2I8 494 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 AAR2Q9Y312 384 aaKnown RBP17.8■□□□□ 0.44
VHL-202ENST00000345392 DERAQ9Y315 318 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 DNAJC15Q9Y5T4 150 aa17.8■□□□□ 0.44
VHL-202ENST00000345392 PLXNA1Q9UIW2 1896 aa17.79■□□□□ 0.44
VHL-202ENST00000345392 LRRC14BA6NHZ5 514 aa17.79■□□□□ 0.44
VHL-202ENST00000345392 SNAP91O60641 907 aa17.79■□□□□ 0.44
VHL-202ENST00000345392 HUS1O60921 280 aa17.79■□□□□ 0.44
VHL-202ENST00000345392 NOL3O60936 208 aaKnown RBP17.79■□□□□ 0.44
VHL-202ENST00000345392 IREB2P48200 963 aaKnown RBP17.79■□□□□ 0.44
VHL-202ENST00000345392 FOXA1P55317 472 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms