RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.31
TCF3-202ENST00000344749 ZNF778Q96MU6 729 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 MCM8Q9UJA3 840 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 MYADML2A6NDP7 307 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 RPP40O75818 363 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 CNTN5O94779 1100 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 SIX3O95343 332 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 MYH9P35579 1960 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 ACVRL1P37023 503 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 AFF1P51825 1210 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 ACOX1Q15067 660 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PGBD3Q8N328 593 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 SMG8Q8ND04 991 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 TNKS2Q9H2K2 1166 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 S100A14Q9HCY8 104 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 KCTD3Q9Y597 815 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 A0A0J9YYE9 177 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PTGES3LE9PB15 166 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 ACSL4O60488 711 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PKMP14618 531 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 CDH2P19022 906 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 POU1F1P28069 291 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 CCND3P30281 292 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 IFNA8P32881 189 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 PPP1R15BQ5SWA1 713 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 RBM20Q5T481 1227 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 ZNF697Q5TEC3 545 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 ZNF280BQ86YH2 543 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PHTF2Q8N3S3 785 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 KBTBD7Q8WVZ9 684 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 KCTD13Q8WZ19 329 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.322e-7■■■□□ 19.2
TCF3-202ENST00000344749 PRR11Q96HE9 360 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 ASB2Q96Q27 587 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 CXCL16Q9H2A7 254 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 GABRQQ9UN88 632 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 IQCF5A8MTL0 148 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 ZBTB14O43829 449 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 CLDN11O75508 207 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 TIPRLO75663 272 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 OR56A5P0C7T3 313 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 PEX2P28328 305 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 ATP6V1E1P36543 226 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 SCNN1AP37088 669 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 TSNQ15631 228 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 PARP15Q460N3 678 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 DOK6Q6PKX4 331 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 NAPRTQ6XQN6 538 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 MICU2Q8IYU8 434 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 ATG16L2Q8NAA4 619 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 RMND5AQ9H871 391 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 EXOSC4Q9NPD3 245 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 FCF1Q9Y324 198 aaKnown RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
TCF3-202ENST00000344749 HS3ST4Q9Y661 456 aa13.08□□□□□ -0.32
TCF3-202ENST00000344749 CA12O43570 354 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 ULK1O75385 1050 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 LRATO95237 230 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 EPB42P16452 691 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 DGKAP23743 735 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 INPP1P49441 399 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 IRF8Q02556 426 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 HIST2H2ACQ16777 129 aaPredicted RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 FAM98BQ52LJ0 330 aaKnown RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 HIST2H2AA3Q6FI13 130 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 C14orf80Q86SX3 495 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 ARL14EPQ8N8R7 260 aaPredicted RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 SNRNP27Q8WVK2 155 aaKnown RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 PPM1MQ96MI6 270 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 FCRL5Q96RD9 977 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 RTKNQ9BST9 563 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 FKBPLQ9UIM3 349 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 STK25O00506 426 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 GPR32O75388 356 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 S100A3P33764 101 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 CCT8P50990 548 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 MLLT6P55198 1093 aaPredicted RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 ATXN7L2Q5T6C5 722 aaPredicted RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 GCNT7Q6ZNI0 430 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 TRAPPC5Q8IUR0 188 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 C19orf60Q96EN9 201 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 PANX3Q96QZ0 392 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 RPL26L1Q9UNX3 145 aaKnown RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 POMPQ9Y244 141 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 ZBTB42B2RXF5 422 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 STX16-NPEPL1H3BU86 382 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 PTGESO14684 152 aa13.07□□□□□ -0.32
TCF3-202ENST00000344749 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
TCF3-202ENST00000344749 COL6A2P12110 1019 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms