RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 HOXD9P28356 352 aaPredicted RBP21.42■■□□□ 1.02
CCDC38-201ENST00000344280 RGRP47804 291 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 INHBCP55103 352 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 SH3BP2P78314 561 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 FOLH1Q04609 750 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 PDAP1Q13442 181 aaKnown RBP21.42■■□□□ 1.02
CCDC38-201ENST00000344280 LRP8Q14114 963 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 REP15Q6BDI9 236 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 PAOXQ6QHF9 649 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 TAS1R1Q7RTX1 841 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 APLFQ8IW19 511 aaPredicted RBP21.42■■□□□ 1.02
CCDC38-201ENST00000344280 L3HYPDHQ96EM0 354 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 FEM1CQ96JP0 617 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 PCDHAC1Q9H158 963 aa21.42■■□□□ 1.02
CCDC38-201ENST00000344280 UBXN8O00124 270 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 FGF1P05230 155 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 FGFR3P22607 806 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 YBEYP58557 167 aaPredicted RBP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 GALNT1Q10472 559 aaPredicted RBP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 RALGDSQ12967 914 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 SQLEQ14534 574 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 UGT3A2Q3SY77 523 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 ICA1LQ8NDH6 482 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 EXOC2Q96KP1 924 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 GLT1D1Q96MS3 346 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 PKP2Q99959 881 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 GIMAP2Q9UG22 337 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 OR6C75A6NL08 312 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 RPP40O75818 363 aaKnown RBP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 ZNF37AP17032 561 aaPredicted RBP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 ATF6P18850 670 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 HLA-DPA1P20036 260 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 MAPKAPK2P49137 400 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 SLC11A1P49279 550 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 FOXA1P55317 472 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 HERVK_113P63132 956 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 GPR17Q13304 367 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 ADGRE1Q14246 886 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 TLR1Q15399 786 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 FBXO48Q5FWF7 155 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 LARP4Q71RC2 724 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 PTGR2Q8N8N7 351 aaPredicted RBP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 BRSK1Q8TDC3 778 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 NSUN5Q96P11 429 aaKnown RBP21.41■■□□□ 1.02
CCDC38-201ENST00000344280 TRIB3Q96RU7 358 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 ERVK-6Q9BXR3 956 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 TMEM161AQ9NX61 479 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 PCDHGB4Q9UN71 923 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 PCDHGB5Q9Y5G0 923 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 SPO11Q9Y5K1 396 aa21.41■■□□□ 1.02
CCDC38-201ENST00000344280 GPC4O75487 556 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 ALDOCP09972 364 aaKnown RBP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 MTHFD2P13995 350 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 RING1Q06587 406 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 LAYNQ6UX15 382 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 ISLR2Q6UXK2 745 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 SPATA24Q86W54 205 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 AFAP1L2Q8N4X5 818 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 OR4L1Q8NH43 312 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 LRGUKQ96M69 825 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 TSC22D3Q99576 134 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 EME2A4GXA9 379 aaPredicted RBP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 ZDHHC11BP0C7U3 371 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 SLC26A3P40879 764 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 RPS24P62847 133 aaKnown RBP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 PDK3Q15120 406 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 PFKFB4Q16877 469 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 PRSS55Q6UWB4 352 aaPredicted RBP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 ABI1Q8IZP0 508 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 GPR150Q8NGU9 434 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 CASD1Q96PB1 797 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 CATSPERZQ9NTU4 200 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 UTP6Q9NYH9 597 aaKnown RBP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 IKZF3Q9UKT9 509 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 DNAJC15Q9Y5T4 150 aa21.4■■□□□ 1.02
CCDC38-201ENST00000344280 ZFP37Q9Y6Q3 630 aaPredicted RBP21.4■■□□□ 1.02
CCDC38-201ENST00000344280 A0A1B0GTL3 188 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 PRSS51A0A1B0GVH4 220 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 F5H5T6 163 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 TRIM38O00635 465 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 SERPINF2P08697 491 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 GRIA2P42262 883 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 NFKB2Q00653 900 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 MRNIPQ6NTE8 343 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 ZFP1Q6P2D0 407 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 FUT10Q6P4F1 479 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 C19orf60Q96EN9 201 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 CDKN2AIPNLQ96HQ2 116 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 KCNA7Q96RP8 456 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 SLC39A3Q9BRY0 314 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 ABT1Q9ULW3 272 aaKnown RBP21.39■■□□□ 1.02
CCDC38-201ENST00000344280 MED16Q9Y2X0 877 aa21.39■■□□□ 1.02
CCDC38-201ENST00000344280 TET1Q8NFU7 2136 aa21.39■■□□□ 1.01
CCDC38-201ENST00000344280 PRORSD1PA6NEY8 169 aa21.39■■□□□ 1.01
CCDC38-201ENST00000344280 ADAM12O43184 909 aa21.39■■□□□ 1.01
CCDC38-201ENST00000344280 CDK14O94921 469 aa21.39■■□□□ 1.01
CCDC38-201ENST00000344280 STC1P52823 247 aa21.39■■□□□ 1.01
CCDC38-201ENST00000344280 GPNMBQ14956 572 aa21.39■■□□□ 1.01
CCDC38-201ENST00000344280 THEMIS2Q5TEJ8 643 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms