RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FGFR3P22607 806 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ALDH1A3P47895 512 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 MAPKAPK2P49137 400 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 GPR17Q13304 367 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 OR4D1Q15615 310 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 MRNIPQ6NTE8 343 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 DENND1CQ8IV53 801 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 FEM1CQ96JP0 617 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 CASD1Q96PB1 797 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 NR1H4Q96RI1 486 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 LRFN2Q9ULH4 789 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 FAM50BQ9Y247 325 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 PSMD12O00232 456 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ENPP3O14638 875 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SMIM24O75264 130 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 GJB5O95377 273 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 IRF1P10914 325 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 IMPDH1P20839 514 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 CCNHP51946 323 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 YBEYP58557 167 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 TIAL1Q01085 375 aaKnown RBP eCLIP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 RALGDSQ12967 914 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 PFKFB4Q16877 469 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 UNC50Q53HI1 259 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 OR4L1Q8NH43 312 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 FAR2Q96K12 515 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 NSMCE3Q96MG7 304 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 NSUN5Q96P11 429 aaKnown RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 CYP2S1Q96SQ9 504 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 PDFQ9HBH1 243 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 DTNAQ9Y4J8 743 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SPO11Q9Y5K1 396 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 H3BMM5 538 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 CD1DP15813 335 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 FDXRP22570 491 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 HOXD9P28356 352 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 FMO4P31512 558 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 SATB1Q01826 763 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 GNA12Q03113 381 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 MED21Q13503 144 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 ICA1LQ8NDH6 482 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 BRSK1Q8TDC3 778 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 BCL7CQ8WUZ0 217 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 C3orf30Q96M34 536 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 LRGUKQ96M69 825 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 CINPQ9BW66 212 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 A0A0U1RQS6 177 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 TBKBP1A7MCY6 615 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 TSPAN3O60637 253 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 WISP3O95389 354 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 UQCRBP14927 111 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 SGSHP51688 502 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 PSME3P61289 254 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 SQLEQ14534 574 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 PTPRRQ15256 657 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 FOXB2Q5VYV0 432 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 REP15Q6BDI9 236 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 TTC16Q8NEE8 873 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 CD99L2Q8TCZ2 262 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 RAET1EQ8TD07 263 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 KLHL32Q96NJ5 620 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 PCDHAC1Q9H158 963 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 PIDD1Q9HB75 910 aa14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 POLR3BQ9NW08 1133 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-202ENST00000343765 C5orf42Q9H799 3197 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 E7ENX8 843 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 GFAPP14136 432 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 ZNF37AP17032 561 aaPredicted RBP14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 VCLP18206 1134 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 SH3BP2P78314 561 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 RING1Q06587 406 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 PAOXQ6QHF9 649 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 CYHR1Q6ZMK1 362 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 CHSY3Q70JA7 882 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 C16orf59Q7L2K0 433 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 OR4K2Q8NGD2 314 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 C19orf60Q96EN9 201 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 SLC39A3Q9BRY0 314 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 GKN1Q9NS71 199 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 PCDHGA7Q9Y5G6 932 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 EME2A4GXA9 379 aaPredicted RBP14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 C9JVG2 144 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 CBX4O00257 560 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 FBP2O00757 339 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 ACSL4O60488 711 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 RHOBTB1O94844 696 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 NDST3O95803 873 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 CDKN1CP49918 316 aaPredicted RBP14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 HERVK_113P63132 956 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 TCTN1Q2MV58 587 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 FBXL19Q6PCT2 694 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 GALNT7Q86SF2 657 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 DCUN1D1Q96GG9 259 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 SPATA17Q96L03 361 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 ERVK-6Q9BXR3 956 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 MID1IP1Q9NPA3 183 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 ZDHHC7Q9NXF8 308 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms