RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 PMS2P1A4D2B8 440 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 RHPN2P1A8MT19 583 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CASC3O15234 703 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 NOBOXO60393 691 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 LIPCP11150 499 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 VIPR1P32241 457 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 PCK1P35558 622 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ZFP36L1Q07352 338 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 SLC10A7Q0GE19 358 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 HLTFQ14527 1009 aaKnown RBP eCLIP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 NCAPHQ15003 741 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CLPPQ16740 277 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CCDC183Q5T5S1 534 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 KIAA1614Q5VZ46 1190 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ARHGAP36Q6ZRI8 547 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 SPRED1Q7Z699 444 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ARFGAP1Q8N6T3 406 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 NUDCD1Q96RS6 583 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 SYT11Q9BT88 431 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CARS2Q9HA77 564 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 B4GALT6Q9UBX8 382 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 PCDHGC4Q9Y5F7 938 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 RNF215Q9Y6U7 377 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 PSMD11O00231 422 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 HTRA2O43464 458 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 LRCH4O75427 683 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CPNE6O95741 557 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CPP00450 1065 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CCNB1P14635 433 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 CD82P27701 267 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 SERPINB6P35237 376 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 DPYSQ14117 519 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 PHF19Q5T6S3 580 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 MARC1Q5VT66 337 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 DENND2CQ68D51 928 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 LRRC49Q8IUZ0 686 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 NPWQ8N729 165 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 GPBAR1Q8TDU6 330 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 ZDHHC1Q8WTX9 485 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 COQ10AQ96MF6 247 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 LGR4Q9BXB1 951 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 B3GNT4Q9C0J1 378 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 HAUS2Q9NVX0 235 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 TRNAU1APQ9NX07 287 aaKnown RBP13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 GOLGA6AQ9NYA3 693 aa13.07□□□□□ -0.32
NECTIN1-203ENST00000341398 AHCTF1Q8WYP5 2266 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 HEXIM1O94992 359 aaKnown RBP13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 SFTPCP11686 197 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 HGFP14210 728 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 AMPD1P23109 780 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 PRKCIP41743 596 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 GPR3P46089 330 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 MAPK10P53779 464 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 CDH6P55285 790 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 TYRO3Q06418 890 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 CNGA3Q16281 694 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 ARMC12Q5T9G4 340 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 USP45Q70EL2 814 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 ZNF571Q7Z3V5 609 aaPredicted RBP13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 POLNQ7Z5Q5 900 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 HEATR4Q86WZ0 1026 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 ATPAF2Q8N5M1 289 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 HSPH1Q92598 858 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 TEX101Q9BY14 249 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 FAM117AQ9C073 453 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 HSD3B7Q9H2F3 369 aa13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 HEMK1Q9Y5R4 338 aaPredicted RBP13.06□□□□□ -0.32
NECTIN1-203ENST00000341398 ZNF462Q96JM2 2506 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 A0A1W2PQC6 194 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 ITGB2P05107 769 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 CEACAM5P06731 702 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 PYGLP06737 847 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 TEAD1P28347 426 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 MMP13P45452 471 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 GNPDA1P46926 289 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 B4GALNT1Q00973 533 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 AMZ1Q400G9 498 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 KCTD16Q68DU8 428 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 RAET1GQ6H3X3 334 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 NYAP1Q6ZVC0 841 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms