RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KLHL35Q6PF15 583 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 PLEKHH3Q7Z736 793 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 OSTM1Q86WC4 334 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 CEP97Q8IW35 865 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 NPWQ8N729 165 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 HDAC10Q969S8 669 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TMIGD2Q96BF3 282 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 ISOC1Q96CN7 298 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 SLC29A1Q99808 456 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 MEAF6Q9HAF1 191 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 SH3PXD2BA1X283 911 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 ATP4BP51164 291 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 MAPK10P53779 464 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 CACNB2Q08289 660 aaPredicted RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 BFSP2Q13515 415 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 PPP1R3AQ16821 1122 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 RGS21Q2M5E4 152 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 BRMS1LQ5PSV4 323 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 RBM20Q5T481 1227 aaKnown RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 FRA10AC1Q70Z53 315 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 OFCC1Q8IZS5 231 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 SMYD1Q8NB12 490 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 C2CD4AQ8NCU7 369 aaPredicted RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 PNPT1Q8TCS8 783 aaKnown RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 DQX1Q8TE96 717 aaKnown RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TWIST2Q8WVJ9 160 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 PIF1Q9H611 641 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 SLC2A6Q9UGQ3 507 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 COL11A2P13942 1736 aaPredicted RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 C7orf72A4D263 438 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 M0R3G1 203 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 UMPSP11172 480 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 BMP2P12643 396 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 BDNFP23560 247 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 CBX3Q13185 183 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TECRLQ5HYJ1 363 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TSTD2Q5T7W7 516 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 LSMEM2Q8N112 164 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 TRPV3Q8NET8 790 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 SLC45A3Q96JT2 553 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 YTHDF1Q9BYJ9 559 aaKnown RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 CCM2LQ9NUG4 571 aaPredicted RBP9.44□□□□□ -0.9
TRERF1-201ENST00000340840 COMMD8Q9NX08 183 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 ACTR3BQ9P1U1 418 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 OAZ3Q9UMX2 235 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 BTRCQ9Y297 605 aa9.44□□□□□ -0.9
TRERF1-201ENST00000340840 E5RI56 91 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 KPNA4O00629 521 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 EI24O14681 340 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 SPTLC1O15269 473 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 KDM1AO60341 852 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 GABBR2O75899 941 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 B3GAT3O94766 335 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 HTR7P34969 479 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 CD86P42081 329 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 PFKPQ01813 784 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 NR1D2Q14995 579 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ATP6AP1LQ52LC2 224 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TTC23Q5W5X9 447 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ZNF420Q8TAQ5 688 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 STAG3L4Q8TBR4 150 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 RMDN1Q96DB5 314 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 CD274Q9NZQ7 290 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 RBPJLQ9UBG7 517 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 GTF2IRD1Q9UHL9 959 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TBC1D30Q9Y2I9 924 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TDRKHQ9Y2W6 561 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TCRBV3S1A0A5B6 114 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 CHRNA4P43681 627 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 CXCR3P49682 368 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 NDST2P52849 883 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ATP6V0D1P61421 351 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 CCNYL2Q5T2Q4 361 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 KCTD11Q693B1 232 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 FAM43BQ6ZT52 329 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 CARM1Q86X55 608 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ZDHHC13Q8IUH4 622 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 FCRL2Q96LA5 508 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 C17orf80Q9BSJ5 609 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 NACA2Q9H009 215 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ABHD16BQ9H3Z7 469 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 MRM3Q9HC36 420 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 SARS2Q9NP81 518 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TAS2R13Q9NYV9 303 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 IPPQ9Y573 584 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 MRPL42Q9Y6G3 142 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 PHIPQ8WWQ0 1821 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 SLC7A4O43246 635 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 SYNCRIPO60506 623 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 PAGE1O75459 146 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ZBTB11O95625 1053 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ITGBL1O95965 494 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 FAM163BP0C2L3 166 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 LINC00032P0C843 101 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms