RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 PRMT2P55345 433 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CREB5Q02930 508 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 EIF4EBP2Q13542 120 aaPredicted RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 PSAPL1Q6NUJ1 521 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 GAREM2Q75VX8 874 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 LYSMD3Q7Z3D4 306 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 ZNF683Q8IZ20 524 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 TMEM199Q8N511 208 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 C12orf76Q8N812 135 aaPredicted RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 SIDT2Q8NBJ9 832 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 SLC26A7Q8TE54 656 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CDH19Q9H159 772 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 MAGEH1Q9H213 219 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 TAGLN3Q9UI15 199 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 NPEPPSL1A6NEC2 478 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 GRXCR1A8MXD5 290 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 LDB2O43679 373 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CRTAMO95727 393 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 LTA4HP09960 611 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 COPAP53621 1224 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 BEND5Q7L4P6 421 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 TRPC4APQ8TEL6 797 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 ATP6V1E2Q96A05 226 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CDKN2AIPNLQ96HQ2 116 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 ASAH2Q9NR71 780 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 RNF112Q9ULX5 631 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CDYLQ9Y232 598 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 XIRP2A4UGR9 3374 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 GSC2O15499 205 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 SNNO75324 88 aaPredicted RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 KLHL2O95198 593 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 RPL14P50914 215 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 ARF5P84085 180 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 ECT2LQ008S8 904 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 NAA25Q14CX7 972 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 KHDC1Q4VXA5 237 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 PAQR3Q6TCH7 311 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 C2CD4AQ8NCU7 369 aaPredicted RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 MDGA1Q8NFP4 955 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 NSUN5Q96P11 429 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 KCNA7Q96RP8 456 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 TREX1Q9NSU2 369 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 OXSMQ9NWU1 459 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 MID2Q9UJV3 735 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 PKP3Q9Y446 797 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 RPP40O75818 363 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 GM2AP17900 193 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 HLA-DPA1P20036 260 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CRABP2P29373 138 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CD70P32970 193 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 ERVFC1P60507 584 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 DSG1Q02413 1049 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 RING1Q06587 406 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 TSNQ15631 228 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 RBBP7Q16576 425 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 MUM1Q2TAK8 710 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 SMYD5Q6GMV2 418 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 PTRHD1Q6GMV3 140 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 LRRC49Q8IUZ0 686 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 GIMAP7Q8NHV1 300 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CCDC97Q96F63 343 aaPredicted RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CDK5RAP1Q96SZ6 601 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 SAR1AQ9NR31 198 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 CCDC167Q9P0B6 97 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 SSX2IPQ9Y2D8 614 aa10.18□□□□□ -0.78
RBFOX1-202ENST00000340209 GREB1Q4ZG55 1949 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 NYNRINQ9P2P1 1898 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 MGRN1O60291 552 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 KATNA1O75449 491 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 CYTH1Q15438 398 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 PPP1R3AQ16821 1122 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 LSM12Q3MHD2 195 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 SGO1Q5FBB7 561 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 ICE2Q659A1 982 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 ZYG11AQ6WRX3 759 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 FAM156AQ8NDB6 213 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 CYB5D2Q8WUJ1 264 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 PYDC1Q8WXC3 89 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 TSPAN17Q96FV3 270 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 BBS2Q9BXC9 721 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 MID1IP1Q9NPA3 183 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 LATS2Q9NRM7 1088 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 CD274Q9NZQ7 290 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 GALPQ9UBC7 116 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 TIMM22Q9Y584 194 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 WNT6Q9Y6F9 365 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 DRGXA6NNA5 263 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 CDC7O00311 574 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 TBC1D4O60343 1298 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 SMIM24O75264 130 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 MTX2O75431 263 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 UGT2B4P06133 528 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 HTR7P34969 479 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 PIK3CGP48736 1102 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 KPNA2P52292 529 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 SMARCB1Q12824 385 aa10.17□□□□□ -0.78
RBFOX1-202ENST00000340209 TEAD2Q15562 447 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms