RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PLIN3O60664 434 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TNFRSF21O75509 655 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 MT-CO1P00395 513 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 GZMAP12544 262 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 BMP2P12643 396 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TGM2P21980 687 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 SERPINB10P48595 397 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 RPL7AP62424 266 aaKnown RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ERVK-8P63133 956 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ORC1Q13415 861 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 IRF3Q14653 427 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 PLEKHG6Q3KR16 790 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 C10orf62Q5T681 223 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ANKRD34AQ69YU3 496 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF517Q6ZMY9 492 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 C15orf52Q6ZUT6 534 aaKnown RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 C16orf62Q7Z3J2 963 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TAGAPQ8N103 731 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 OR8H1Q8NGG4 311 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 RSAD2Q8WXG1 361 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 USP7Q93009 1102 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 LRCH3Q96II8 777 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ZBTB20Q9HC78 741 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 SLAMF7Q9NQ25 335 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 PAK1IP1Q9NWT1 392 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ZC3H7BQ9UGR2 993 aaKnown RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 DNMT3AQ9Y6K1 912 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TJP1Q07157 1748 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 WDR64B1ANS9 1081 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 E7ESA3 106 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 XPNPEP2O43895 674 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PRKCGP05129 697 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 JUNBP17275 347 aaPredicted RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CRHBPP24387 322 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PSMB9P28065 219 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 RPS9P46781 194 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 GABRB2P47870 512 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ADCY7P51828 1080 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ARHGDIBP52566 201 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC7A2P52569 658 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 TPD52P55327 224 aaPredicted RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 GRM4Q14833 912 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 TAB1Q15750 504 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 GLRA4Q5JXX5 417 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 GADL1Q6ZQY3 521 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 HORMAD1Q86X24 394 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PLD3Q8IV08 490 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 LACC1Q8IV20 430 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ADGRF4Q8IZF3 695 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 OR8H3Q8N146 312 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 MPP5Q8N3R9 675 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PARP16Q8N5Y8 322 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 MYCT1Q8N699 235 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 OR52H1Q8NGJ2 320 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 NKD2Q969F2 451 aaPredicted RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 HDAC10Q969S8 669 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 INTS12Q96CB8 462 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CNDP2Q96KP4 475 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 RIPOR3Q96MK2 946 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PGLYRP2Q96PD5 576 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 RHNO1Q9BSD3 238 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SP110Q9HB58 689 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 FBXO5Q9UKT4 447 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF175Q9Y473 711 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PCDHB3Q9Y5E6 796 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 COPG1Q9Y678 874 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 TEX264Q9Y6I9 313 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 H3BMM5 538 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 RETP07949 1114 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 MTHFD1P11586 935 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SELLP14151 372 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CAPZA2P47755 286 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CLK1P49759 484 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SCNN1GP51170 649 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ERVFC1P60507 584 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 GSTO1P78417 241 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 GHRHRQ02643 423 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 DSC1Q08554 894 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ABRQ12979 859 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CSTF3Q12996 717 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ATP6AP1Q15904 470 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PARP15Q460N3 678 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 PYCR3Q53H96 274 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 FAM160B1Q5W0V3 765 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SPOCD1Q6ZMY3 1216 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CMC1Q7Z7K0 106 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 DHFR2Q86XF0 187 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 KATNAL2Q8IYT4 538 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 MCOLN2Q8IZK6 566 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SVOPQ8N4V2 548 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 MUL1Q969V5 352 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ITCHQ96J02 903 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms