RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 LYNP07948 512 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 DLG4P78352 724 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SPIBQ01892 262 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SULT2A1Q06520 285 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 KLHL35Q6PF15 583 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 LRRC52Q8N7C0 313 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 TSEN2Q8NCE0 465 aaKnown RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 ZNF214Q9UL59 606 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 FSCN2O14926 492 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 NTRK1P04629 796 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 SLC6A2P23975 617 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PDHA2P29803 388 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 CDH5P33151 784 aaPredicted RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 PRKAG1P54619 331 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PTPRNQ16849 979 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 C16orf59Q7L2K0 433 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 MTFMTQ96DP5 389 aaKnown RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PANX1Q96RD7 426 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 MRIQ9BWK5 157 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 KCNMB3Q9NPA1 279 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 hCG_1818297A0A087WSY0 165 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 RFXANKO14593 260 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 AXIN1O15169 862 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 KELP23276 732 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 GRPEL2Q8TAA5 225 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 AGAP11Q8TF27 550 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 MKL1Q969V6 931 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 FAM124BQ9H5Z6 455 aaPredicted RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 SP140LQ9H930 580 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 FAM86C2PA6NEL3 165 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 FGBP02675 491 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 CELF3Q5SZQ8 465 aaKnown RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 LLGL2Q6P1M3 1020 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 SHC3Q92529 594 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 TDRD1Q9BXT4 1180 aaKnown RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 SENP6Q9GZR1 1112 aaPredicted RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 ASAH2Q9NR71 780 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 IL17RBQ9NRM6 502 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 SOHLH2Q9NX45 425 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PRMT5O14744 637 aaPredicted RBP13.1□□□□□ -0.31
HLCS-201ENST00000336648 USP12O75317 370 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 ERCC2P18074 760 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 FGFR3P22607 806 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 ZMYND11Q15326 602 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 RAET1GQ6H3X3 334 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 FAM131AQ6UXB0 335 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 TMPRSS11AQ6ZMR5 421 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 CHSY3Q70JA7 882 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 PCDHB1Q9Y5F3 818 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
HLCS-201ENST00000336648 KMOO15229 486 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 MAFO75444 373 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 SLC22A3O75751 556 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 CXCL9Q07325 125 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 BEND5Q7L4P6 421 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 SLC47A1Q96FL8 570 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 CORO1CQ9ULV4 474 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 DHRS7Q9Y394 339 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 METTL21EPA6NDL7 271 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 LOC110117498-PIK3R3F6TDL0 507 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 GTPBP1O00178 669 aaKnown RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 ADAM17P78536 824 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 CDK18Q07002 472 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 RAB43Q86YS6 212 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 DNAJB14Q8TBM8 379 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 ADAM2Q99965 735 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 MAGEB3O15480 346 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 NOS1APO75052 506 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 KRT33AO76009 404 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 APOL3O95236 402 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 RAP1GAP2Q684P5 730 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 PYHIN1Q6K0P9 492 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 FAM171BQ6P995 826 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 OR4L1Q8NH43 312 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms