RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PCDHGA7Q9Y5G6 932 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 THSD7BQ9C0I4 1608 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 A0A0D9SEW6 157 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 CCDC189A1A4V9 331 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 RPP40O75818 363 aaKnown RBP17.72■□□□□ 0.43
LRCH3-201ENST00000334859 SERPINF2P08697 491 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 CAP1Q01518 475 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 IL31Q6EBC2 164 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 RNF19BQ6ZMZ0 732 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 PTGR2Q8N8N7 351 aaPredicted RBP17.72■□□□□ 0.43
LRCH3-201ENST00000334859 OR9I1Q8NGQ6 314 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 C19orf60Q96EN9 201 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 ACTL7AQ9Y615 435 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 UBA6A0AVT1 1052 aaPredicted RBP17.72■□□□□ 0.43
LRCH3-201ENST00000334859 E7ENX8 843 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 ACOT8O14734 319 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 CD1DP15813 335 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 GATMP50440 423 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 FAM189BP81408 668 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 ACVR1Q04771 509 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 RING1Q06587 406 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 DUSP4Q13115 394 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 LAMB3Q13751 1172 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 OR4L1Q8NH43 312 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 FAM192AQ9GZU8 254 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 POLR3BQ9NW08 1133 aaPredicted RBP17.72■□□□□ 0.43
LRCH3-201ENST00000334859 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
LRCH3-201ENST00000334859 FBP2O00757 339 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 SIX3O95343 332 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-201ENST00000334859 SNRPB2P08579 225 aaKnown RBP17.71■□□□□ 0.43
LRCH3-201ENST00000334859 ZNF37AP17032 561 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-201ENST00000334859 STX1BP61266 288 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 RALGDSQ12967 914 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 UNC50Q53HI1 259 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 NAIF1Q69YI7 327 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-201ENST00000334859 LAYNQ6UX15 382 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 RSPO2Q6UXX9 243 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-201ENST00000334859 LILRA2Q8N149 483 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 OR7D4Q8NG98 312 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 BRSK1Q8TDC3 778 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 ASB9Q96DX5 294 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 SPON2Q9BUD6 331 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 UNC93B1Q9H1C4 597 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 FBRSL1Q9HCM7 1045 aaKnown RBP17.71■□□□□ 0.43
LRCH3-201ENST00000334859 TMEM161AQ9NX61 479 aa17.71■□□□□ 0.43
LRCH3-201ENST00000334859 C15orf38-AP3S2A0A0A6YYH1 394 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 UBXN8O00124 270 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 MRASO14807 208 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 PRSS56P0CW18 603 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 NFKB2Q00653 900 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
LRCH3-201ENST00000334859 TLR1Q15399 786 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 OR4D1Q15615 310 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 PFKFB4Q16877 469 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 ARPINQ7Z6K5 226 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 RAB44Q7Z6P3 723 aaPredicted RBP17.7■□□□□ 0.42
LRCH3-201ENST00000334859 EXOC2Q96KP1 924 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 PKP2Q99959 881 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 SLC25A23Q9BV35 468 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 NACA2Q9H009 215 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 PDFQ9HBH1 243 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 GFAPP14136 432 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 HOXB8P17481 243 aaPredicted RBP17.7■□□□□ 0.42
LRCH3-201ENST00000334859 CHN2P52757 468 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 STC1P52823 247 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 KIF19Q2TAC6 998 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 CYHR1Q6ZMK1 362 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 BBS5Q8N3I7 341 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 CATSPER1Q8NEC5 780 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 SPDYE1Q8NFV5 336 aaPredicted RBP17.7■□□□□ 0.42
LRCH3-201ENST00000334859 GPR150Q8NGU9 434 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 PEX13Q92968 403 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 CENPKQ9BS16 269 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 PCDHAC1Q9H158 963 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 Q9H521 79 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 MID1IP1Q9NPA3 183 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 SPAG4Q9NPE6 437 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 SUCOQ9UBS9 1254 aaKnown RBP17.7■□□□□ 0.42
LRCH3-201ENST00000334859 ABT1Q9ULW3 272 aaKnown RBP17.7■□□□□ 0.42
LRCH3-201ENST00000334859 GREB1Q4ZG55 1949 aa17.7■□□□□ 0.42
LRCH3-201ENST00000334859 LRRC14BA6NHZ5 514 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 VNN2O95498 520 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 NDST3O95803 873 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 PENKP01210 267 aaPredicted RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 EPOP01588 193 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 FESP07332 822 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 TIAL1Q01085 375 aaKnown RBP eCLIP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 GPR17Q13304 367 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 LRP8Q14114 963 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 ACBD5Q5T8D3 534 aaPredicted RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 PAOXQ6QHF9 649 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 RMDN1Q96DB5 314 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 C3orf30Q96M34 536 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 CINPQ9BW66 212 aaPredicted RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 PTGDR2Q9Y5Y4 395 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 CASP8AP2Q9UKL3 1982 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 PRSS51A0A1B0GVH4 220 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 NT5C1B-RDH14C9J2C7 533 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 H3BMM5 538 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms