RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 INTS7Q9NVH2 962 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DDX43Q9NXZ2 648 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 VPS51Q9UID3 782 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 KCNU1A8MYU2 1149 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SLC30A4O14863 429 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 AXIN1O15169 862 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 BUD23O43709 281 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A5P35504 534 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SREBF1P36956 1147 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DRG2P55039 364 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 GCNT1Q02742 428 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 MAMLD1Q13495 774 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 COLEC12Q5KU26 742 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 AGMOQ6ZNB7 445 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 VAT1Q99536 393 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SLC28A2O43868 658 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SNX4O95219 450 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PGLSO95336 258 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 FTH1P02794 183 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 MT-ND1P03886 318 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ACVR2BQ13705 512 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ACAP2Q15057 778 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TIGD2Q4W5G0 525 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 NCCRP1Q6ZVX7 275 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 GALNTL5Q7Z4T8 443 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 STK40Q8N2I9 435 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 VANGL1Q8TAA9 524 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 IPCEF1Q8WWN9 437 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ART5Q96L15 291 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 COLEC11Q9BWP8 271 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 NEK6Q9HC98 313 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF99A8MXY4 864 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SHOX2O60902 331 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 MAPK12P53778 367 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 DOK6Q6PKX4 331 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SP8Q8IXZ3 490 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ZZZ3Q8IYH5 903 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 FEM1AQ9BSK4 669 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PDE10AQ9Y233 779 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SPATA31A3Q5VYP0 1347 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 BTNL10A8MVZ5 291 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 RPLP0P05388 317 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SLC6A2P23975 617 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TIE1P35590 1138 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 HERC3Q15034 1050 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 DLG2Q15700 870 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CTXN3Q4LDR2 81 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 RD3Q7Z3Z2 195 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF366Q8N895 744 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SPACA7Q96KW9 195 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF354BQ96LW1 612 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CCL15-CCL14A0A0B4J2E2 113 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TCRBV9S1A1TA0A576 114 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 C17orf102A2RUQ5 167 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A9O60656 530 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 RNASEH1O60930 286 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CSH1P0DML2 217 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CSH2P0DML3 217 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A6P19224 532 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A1P22309 533 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A4P22310 534 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A3P35503 534 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 MAN2A2P49641 1150 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CDH8P55286 799 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SREBF2Q12772 1141 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PPIL2Q13356 520 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 SLC1A5Q15758 541 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CCL15Q16663 113 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CUZD1Q86UP6 607 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 LZTR1Q8N653 840 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 RAB2BQ8WUD1 216 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 HSPBAP1Q96EW2 488 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 EBNA1BP2Q99848 306 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CADM1Q9BY67 442 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TKTL2Q9H0I9 626 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TMEM168Q9H0V1 697 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A7Q9HAW7 530 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A10Q9HAW8 530 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT1A8Q9HAW9 530 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 AASSQ9UDR5 926 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 OR2AT4A6NND4 320 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 E5RJQ4 531 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 RBMXL2O75526 392 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 UGT2B17O75795 530 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PCDH8O95206 1070 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TRUB2O95900 331 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 DNTTP04053 509 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 FABP3P05413 133 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 YES1P07947 543 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CDKL1Q00532 357 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 TXNDC11Q6PKC3 985 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 NEK7Q8TDX7 302 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CD101Q93033 1021 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 MND1Q9BWT6 205 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 CST11Q9H112 138 aa9.81□□□□□ -0.84
COL4A6-201ENST00000334504 KAT8Q9H7Z6 458 aaKnown RBP9.81□□□□□ -0.84
COL4A6-201ENST00000334504 PREBQ9HCU5 417 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms