RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 B4GALT4O60513 344 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 GJB1P08034 283 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 ITIH1P19827 911 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 ARL4AP40617 200 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 SLC6A3Q01959 620 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 OLIG2Q13516 323 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 ZIK1Q3SY52 487 aaPredicted RBP24.35■■□□□ 1.49
SOX1-201ENST00000330949 CATSPER4Q7RTX7 472 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 MRPL57Q9BQC6 102 aaKnown RBP24.35■■□□□ 1.49
SOX1-201ENST00000330949 HACL1Q9UJ83 578 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 A6NL46 340 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 H0Y858 1186 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 KPNA2P52292 529 aaKnown RBP24.35■■□□□ 1.49
SOX1-201ENST00000330949 BACE1P56817 501 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 LRRC71Q8N4P6 559 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 AGBL3Q8NEM8 1001 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 VPS33AQ96AX1 596 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 NXNL1Q96CM4 212 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 GPR78Q96P69 363 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 TLR9Q9NR96 1032 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 TSPAN16Q9UKR8 245 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 PDE10AQ9Y233 779 aa24.35■■□□□ 1.49
SOX1-201ENST00000330949 USP12O75317 370 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 GABARAPO95166 117 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 SUPT20HL2P0C7V6 817 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 KRT6CP48668 564 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 RGS7P49802 495 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PPP5CP53041 499 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 BST2Q10589 180 aaKnown RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 CAPSQ13938 189 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 TMEM132AQ24JP5 1023 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 SUPT20HL1Q3ZLR7 823 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 OTUD3Q5T2D3 398 aaPredicted RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 LCLAT1Q6UWP7 414 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PID1Q7Z2X4 250 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PSTKQ8IV42 348 aaKnown RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 UBXN10Q96LJ8 280 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PPP1R16BQ96T49 567 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 RNF38Q9H0F5 515 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 NECTIN3Q9NQS3 549 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 CMTM6Q9NX76 183 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 ZNF214Q9UL59 606 aaPredicted RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 TRIP11Q15643 1979 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 A0A0J9YYE9 177 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 NR5A2O00482 541 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 ANGPT2O15123 496 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 MFSD11O43934 449 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 AP2A1O95782 977 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 ALDH3A2P51648 485 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PGGT1BP53609 377 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PHC1P78364 1004 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 CUZD1Q86UP6 607 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 CCNYQ8ND76 341 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 BEST2Q8NFU1 509 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PHF10Q8WUB8 498 aaKnown RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 TRIT1Q9H3H1 467 aaKnown RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 TBC1D14Q9P2M4 693 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 PCDHGA3Q9Y5H0 932 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 GOT1P17174 413 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 ARSFP54793 590 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 RAB10P61026 200 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 TBPL2Q6SJ96 375 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 SLC22A17Q8WUG5 538 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 CYP3A43Q9HB55 503 aa24.34■■□□□ 1.49
SOX1-201ENST00000330949 MAGED2Q9UNF1 606 aaPredicted RBP24.34■■□□□ 1.49
SOX1-201ENST00000330949 NDUFS2O75306 463 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 SLC6A2P23975 617 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 CD40LGP29965 261 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 GRK3P35626 688 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 COPZ1P61923 177 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 DLK2Q6UY11 383 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 AGMOQ6ZNB7 445 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 FAM35AQ86V20 835 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 SLC41A1Q8IVJ1 513 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 IQCF2Q8IXL9 164 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 MTMR14Q8NCE2 650 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 SGCDQ92629 289 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 HTRA1Q92743 480 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 DACH2Q96NX9 599 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 CLSTN3Q9BQT9 956 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 MAGEB5Q9BZ81 275 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 OR2B2Q9GZK3 357 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 CASS4Q9NQ75 786 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 PCDHGA11Q9Y5H2 935 aa24.33■■□□□ 1.49
SOX1-201ENST00000330949 TCRBV5S2A0A599 114 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 MSCO60682 206 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 THRBP10828 461 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 IL7RP16871 459 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 GPX3P22352 226 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 YWHAQP27348 245 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 EFNA5P52803 228 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 KIF19Q2TAC6 998 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 RAVER1Q8IY67 606 aaKnown RBP24.33■■□□□ 1.48
SOX1-201ENST00000330949 KHSRPQ92945 711 aaKnown RBP eCLIP24.33■■□□□ 1.48
SOX1-201ENST00000330949 CCDC126Q96EE4 140 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 CPB2Q96IY4 423 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 ELMO2Q96JJ3 720 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 RGS17Q9UGC6 210 aaPredicted RBP24.33■■□□□ 1.48
SOX1-201ENST00000330949 USP3Q9Y6I4 520 aa24.33■■□□□ 1.48
SOX1-201ENST00000330949 TBKBP1A7MCY6 615 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms