RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SETXQ7Z333 2677 aaKnown RBP23.36■■□□□ 1.33
TMEM54-201ENST00000329151 PRSS38A1L453 326 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 RHPN2P1A8MT19 583 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 J3QKU1 62 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 LRCH4O75427 683 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 MYCLP1P12525 358 aaPredicted RBP23.35■■□□□ 1.33
TMEM54-201ENST00000329151 HGFP14210 728 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 VIPR1P32241 457 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 SERPINB6P35237 376 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 USP53Q70EK8 1073 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 APTXQ7Z2E3 356 aaKnown RBP23.35■■□□□ 1.33
TMEM54-201ENST00000329151 NDUFAF2Q8N183 169 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 ARHGAP9Q9BRR9 750 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 RTN4Q9NQC3 1192 aaKnown RBP23.35■■□□□ 1.33
TMEM54-201ENST00000329151 RNF215Q9Y6U7 377 aa23.35■■□□□ 1.33
TMEM54-201ENST00000329151 NUDT21O43809 227 aaKnown RBP23.34■■□□□ 1.33
TMEM54-201ENST00000329151 TRIM23P36406 574 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 PPM1FP49593 454 aaPredicted RBP23.34■■□□□ 1.33
TMEM54-201ENST00000329151 MAPK10P53779 464 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 SLC10A7Q0GE19 358 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 SMTNL2Q2TAL5 461 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 ANO6Q4KMQ2 910 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 BOLA3Q53S33 107 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 TMEM164Q5U3C3 297 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 OGFOD3Q6PK18 319 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 NYAP1Q6ZVC0 841 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 SPRED1Q7Z699 444 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 ARFGAP1Q8N6T3 406 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 ZSCAN1Q8NBB4 408 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 MED8Q96G25 268 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 SYT11Q9BT88 431 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 ZMYND15Q9H091 742 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.34■■□□□ 1.33
TMEM54-201ENST00000329151 PCDHGC4Q9Y5F7 938 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 SCN8AQ9UQD0 1980 aa23.34■■□□□ 1.33
TMEM54-201ENST00000329151 TRAFD1O14545 582 aaPredicted RBP23.33■■□□□ 1.33
TMEM54-201ENST00000329151 LIPCP11150 499 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 PCK1P35558 622 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 DPYSQ14117 519 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 AMZ1Q400G9 498 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 TDRD12Q587J7 1177 aaKnown RBP23.33■■□□□ 1.33
TMEM54-201ENST00000329151 RAET1GQ6H3X3 334 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 USP45Q70EL2 814 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 ZNF571Q7Z3V5 609 aaPredicted RBP23.33■■□□□ 1.33
TMEM54-201ENST00000329151 PIM3Q86V86 326 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 HEATR4Q86WZ0 1026 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 TTC9Q92623 222 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 NUDCD1Q96RS6 583 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 LGR4Q9BXB1 951 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 TRIM7Q9C029 511 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 HAUS2Q9NVX0 235 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 AIPL1Q9NZN9 384 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 PHTF1Q9UMS5 762 aa23.33■■□□□ 1.33
TMEM54-201ENST00000329151 TTC24A2A3L6 582 aaPredicted RBP23.32■■□□□ 1.32
TMEM54-201ENST00000329151 NVLO15381 856 aaKnown RBP23.32■■□□□ 1.32
TMEM54-201ENST00000329151 NOBOXO60393 691 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 CCNB1P14635 433 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 ALDH4A1P30038 563 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 SSR1P43307 286 aaKnown RBP23.32■■□□□ 1.32
TMEM54-201ENST00000329151 GNPDA1P46926 289 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 CDH6P55285 790 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 HLTFQ14527 1009 aaKnown RBP eCLIP23.32■■□□□ 1.32
TMEM54-201ENST00000329151 KRT81Q14533 505 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 CNGA3Q16281 694 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 MANEAQ5SRI9 462 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 MARC1Q5VT66 337 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 KCTD16Q68DU8 428 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 ZDHHC1Q8WTX9 485 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 COQ10AQ96MF6 247 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 HSD3B7Q9H2F3 369 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 SSUH2Q9Y2M2 353 aa23.32■■□□□ 1.32
TMEM54-201ENST00000329151 HEXIM1O94992 359 aaKnown RBP23.31■■□□□ 1.32
TMEM54-201ENST00000329151 CPNE6O95741 557 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 SERPINC1P01008 464 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 AMPD1P23109 780 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 PRKCIP41743 596 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 MMP13P45452 471 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 ITKQ08881 620 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 PIGHQ14442 188 aaPredicted RBP23.31■■□□□ 1.32
TMEM54-201ENST00000329151 DPYSL2Q16555 572 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 RALGPS1Q5JS13 557 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 ARMC12Q5T9G4 340 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 CCL4L1Q8NHW4 92 aa23.31■■□□□ 1.32
TMEM54-201ENST00000329151 HEMK1Q9Y5R4 338 aaPredicted RBP23.31■■□□□ 1.32
TMEM54-201ENST00000329151 A0A1W2PQC6 194 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 B8ZZF3 427 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 PSMD11O00231 422 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 DDX3XO00571 662 aaKnown RBP eCLIP23.3■■□□□ 1.32
TMEM54-201ENST00000329151 HTRA2O43464 458 aaPredicted RBP23.3■■□□□ 1.32
TMEM54-201ENST00000329151 ITIH1P19827 911 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 ETV3P41162 512 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 SGF29Q96ES7 293 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 DTD2Q96FN9 168 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 BPIFA3Q9BQP9 254 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 CDH19Q9H159 772 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 NOD2Q9HC29 1040 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 TRNAU1APQ9NX07 287 aaKnown RBP23.3■■□□□ 1.32
TMEM54-201ENST00000329151 ACSL6Q9UKU0 697 aa23.3■■□□□ 1.32
TMEM54-201ENST00000329151 SKILP12757 684 aa23.29■■□□□ 1.32
TMEM54-201ENST00000329151 GPR1P46091 355 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms